RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 UBE2HP62256 183 aa16.08■□□□□ 0.17
SNRNP27-201ENST00000244227 GUCY1B3Q02153 619 aa16.08■□□□□ 0.17
SNRNP27-201ENST00000244227 OTUD7BQ6GQQ9 843 aa16.08■□□□□ 0.17
SNRNP27-201ENST00000244227 CERS3Q8IU89 383 aa16.08■□□□□ 0.17
SNRNP27-201ENST00000244227 NOL10Q9BSC4 688 aaKnown RBP16.08■□□□□ 0.17
SNRNP27-201ENST00000244227 GOLGA6L3A6NEY3 463 aa16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 RCAN1P53805 252 aa16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 ZNF445P59923 1031 aa16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 CSPP1Q1MSJ5 1256 aa16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 ILDR1Q86SU0 546 aaPredicted RBP16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 FBXO18Q8NFZ0 1043 aa16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 MXD3Q9BW11 206 aa16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 TFIP11Q9UBB9 837 aaKnown RBP16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 DAGLAQ9Y4D2 1042 aa16.08■□□□□ 0.16
SNRNP27-201ENST00000244227 ELP1O95163 1332 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 CDKL5O76039 1030 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 SLC3A2P08195 630 aaKnown RBP16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 SYNE3Q6ZMZ3 975 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 MAPKAPK5Q8IW41 473 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 SLF2Q8IX21 1173 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 RGS22Q8NE09 1264 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 PHKBQ93100 1093 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 C8orf76Q96K31 380 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 GJB4Q9NTQ9 266 aa16.07■□□□□ 0.16
SNRNP27-201ENST00000244227 C10orf71Q711Q0 1435 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 IFNAR1P17181 557 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 PLCD1P51178 756 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 PDE4BQ07343 736 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 SLC4A8Q2Y0W8 1093 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 CPLX2Q6PUV4 134 aaKnown RBP16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 PODNQ7Z5L7 613 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 TEX11Q8IYF3 940 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 DYNLL2Q96FJ2 89 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 AIFM3Q96NN9 605 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 DBNDD1Q9H9R9 158 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 KCNQ5Q9NR82 932 aa16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
SNRNP27-201ENST00000244227 PLCG2P16885 1265 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 IARSP41252 1262 aaKnown RBP16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 RTN1Q16799 776 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 IQCA1Q86XH1 822 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 FANCBQ8NB91 859 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 CDK5RAP2Q96SN8 1893 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 UBE2Q2LH0YL09 131 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 NMT2O60551 498 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 FMNL1O95466 1100 aaPredicted RBP16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 SLC16A10Q8TF71 515 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 FLT1P17948 1338 aa16.05■□□□□ 0.16
SNRNP27-201ENST00000244227 DLEC1Q9Y238 1755 aa16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 TROAPQ12815 778 aa16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 IFIT1BQ5T764 474 aaKnown RBP16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 TTF2Q9UNY4 1162 aaKnown RBP16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 DDX60LQ5H9U9 1706 aaKnown RBP16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 NAV1Q8NEY1 1877 aa16.04■□□□□ 0.16
SNRNP27-201ENST00000244227 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 L1TD1Q5T7N2 865 aaKnown RBP16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 RCSD1Q6JBY9 416 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 NUP133Q8WUM0 1156 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 SPATA32Q96LK8 384 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 KIF28PB7ZC32 967 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 G3V3G9 751 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 POLR3DP05423 398 aaPredicted RBP16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 KCNA3P22001 575 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 NT5C2P49902 561 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 SSRP1Q08945 709 aaKnown RBP16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 CC2D2BQ6DHV5 1058 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 CRACR2BQ8N4Y2 399 aaPredicted RBP16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 SLC26A6Q9BXS9 759 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 IL17RBQ9NRM6 502 aa16.03■□□□□ 0.16
SNRNP27-201ENST00000244227 CCDC196A0A1B0GTZ2 297 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 TSPY2A6NKD2 308 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 ECE2O60344 883 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 GUCY1A2P33402 732 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 TFAP4Q01664 338 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 KIF23Q02241 960 aaPredicted RBP16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 PPP2R5BQ15173 497 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 KRT40Q6A162 431 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 ATL3Q6DD88 541 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 HHIPL2Q6UWX4 724 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 CMTR1Q8N1G2 835 aaKnown RBP16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 SLC44A5Q8NCS7 719 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 PGBD1Q96JS3 809 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 USP28Q96RU2 1077 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 FTOQ9C0B1 505 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 RCOR1Q9UKL0 485 aa16.02■□□□□ 0.16
SNRNP27-201ENST00000244227 CFAP45Q9UL16 551 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms