RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 USP17L20D6RJB6 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 CD46P15529 392 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 NDUFV2P19404 249 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 PAX3P23760 479 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 TNNI2P48788 182 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 GYS2P54840 703 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 TBX4P57082 545 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 ST5P78524 1137 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L24Q0WX57 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 GRAPQ13588 217 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 ZKSCAN2Q63HK3 967 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 TMC4Q7Z404 712 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 NBPF5PQ86XG9 351 aaPredicted RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 NUTM1Q86Y26 1132 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 TMEM57Q8N5G2 664 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 GRAPLQ8TC17 118 aaPredicted RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 VPS33BQ9H267 617 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 SCN4AP35499 1836 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 ATP5J2-PTCD1G3V325 749 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 ENPP3O14638 875 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 IRS4O14654 1257 aaPredicted RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 CHRNA5P30532 468 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 TNNT3P45378 269 aaPredicted RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 NASPP49321 788 aaPredicted RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 AIMP1Q12904 312 aaKnown RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 FKBP5Q13451 457 aaPredicted RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 MVPQ14764 893 aaKnown RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 PPP1R18Q6NYC8 613 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 PLEKHM2Q8IWE5 1019 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 SIRT2Q8IXJ6 389 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 PDCL2Q8N4E4 241 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 TTC13Q8NBP0 860 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 SRCIN1Q9C0H9 1055 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 ACBD3Q9H3P7 528 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 TOMM22Q9NS69 142 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 BIN2Q9UBW5 565 aaPredicted RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 PRR12Q9ULL5 1215 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 ATP6V0A2Q9Y487 856 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 MRPL42Q9Y6G3 142 aaKnown RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 CCDC88AQ3V6T2 1871 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 CIAO1O76071 339 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 DKK1O94907 266 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 P4HBP07237 508 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 ATP2B1P20020 1258 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 GPTP24298 496 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 MAP3K9P80192 1104 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 CTDSPL2Q05D32 466 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 GABPB1Q06547 395 aaPredicted RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 FOXD4Q12950 439 aaPredicted RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 CSPP1Q1MSJ5 1256 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 PRPF40BQ6NWY9 871 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 TAS1R3Q7RTX0 852 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 NBPF11Q86T75 865 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 FAM89AQ96GI7 184 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 MEIS3Q99687 375 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 SPOCK3Q9BQ16 436 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 PLA2G2EQ9NZK7 142 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 FOCADQ5VW36 1801 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 AKAP11Q9UKA4 1901 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 A0A0G2JLW4 131 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 ICMTO60725 284 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 FGFR2P21802 821 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 ATP2B4P23634 1241 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 GTF2F1P35269 517 aaKnown RBP eCLIP4.32□□□□□ -1.72
UFM1-201ENST00000239878 PPP4CP60510 307 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 LONRF3Q496Y0 759 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 ATG9AQ7Z3C6 839 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 C2CD5Q86YS7 1000 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 SP8Q8IXZ3 490 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 SSH3Q8TE77 659 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 TSPYL1Q9H0U9 437 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 GREM2Q9H772 168 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 RNF19AQ9NV58 838 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 BSDC1Q9NW68 430 aaPredicted RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 ZKSCAN5Q9Y2L8 839 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 MED23Q9ULK4 1368 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 CCDC189A1A4V9 331 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 IPO8O15397 1037 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 RGS20O76081 388 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 RHBDL3P58872 404 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 TERF2Q15554 542 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 OCLNQ16625 522 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 PRPF38BQ5VTL8 546 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 TSHZ1Q6ZSZ6 1077 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 DZIP1LQ8IYY4 767 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 CELF1Q92879 486 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 BICC1Q9H694 974 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 ZSWIM4Q9H7M6 989 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 COPRSQ9NQ92 184 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 DDX56Q9NY93 547 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 RAI14Q9P0K7 980 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 CALCOCO1Q9P1Z2 691 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 TRMT112Q9UI30 125 aaKnown RBP4.32□□□□□ -1.72
UFM1-201ENST00000239878 SRCAPQ6ZRS2 3230 aa4.32□□□□□ -1.72
UFM1-201ENST00000239878 ZNF804BA4D1E1 1349 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 KDM2BQ8NHM5 1336 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 USP17L3A6NCW0 530 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 USP17L4A6NCW7 530 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 PLIN1O60240 522 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 BBOX1O75936 387 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms