RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PDE4BQ07343 736 aa27.04■■□□□ 1.92
MSX2-201ENST00000239243 GPR101Q96P66 508 aaPredicted RBP27.04■■□□□ 1.92
MSX2-201ENST00000239243 LTBP1Q14766 1721 aa27.04■■□□□ 1.92
MSX2-201ENST00000239243 MAP3K11Q16584 847 aa27.04■■□□□ 1.92
MSX2-201ENST00000239243 TBC1D22AQ8WUA7 517 aa27.04■■□□□ 1.92
MSX2-201ENST00000239243 POLR3EQ9NVU0 708 aa27.04■■□□□ 1.92
MSX2-201ENST00000239243 ECM29Q5VYK3 1845 aa27.03■■□□□ 1.92
MSX2-201ENST00000239243 NPR1P16066 1061 aa27.03■■□□□ 1.92
MSX2-201ENST00000239243 MYSM1Q5VVJ2 828 aa27.03■■□□□ 1.92
MSX2-201ENST00000239243 FANCBQ8NB91 859 aa27.03■■□□□ 1.92
MSX2-201ENST00000239243 SLC26A6Q9BXS9 759 aa27.03■■□□□ 1.92
MSX2-201ENST00000239243 MYH2Q9UKX2 1941 aa27.03■■□□□ 1.92
MSX2-201ENST00000239243 MROH7-TTC4A0A0A0MT08 1334 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 YEATS4O95619 227 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 PDE6BP35913 854 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 UVSSAQ2YD98 709 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 KRT40Q6A162 431 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 AMOTL1Q8IY63 956 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 POLLQ9UGP5 575 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 ATP6V0A2Q9Y487 856 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 PARP3Q9Y6F1 533 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 DLEC1Q9Y238 1755 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 CALM1P0DP23 149 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 CALM2P0DP24 149 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 CALM3P0DP25 149 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 USP5P45974 858 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 IFIT1BQ5T764 474 aaKnown RBP27.02■■□□□ 1.92
MSX2-201ENST00000239243 SLF2Q8IX21 1173 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 ENAHQ8N8S7 591 aaPredicted RBP27.02■■□□□ 1.92
MSX2-201ENST00000239243 RNF214Q8ND24 703 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 FUCA2Q9BTY2 467 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 TNMDQ9H2S6 317 aa27.02■■□□□ 1.92
MSX2-201ENST00000239243 C6orf229H3BNL8 230 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 CCDC192P0DO97 292 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 ALDH1B1P30837 517 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 CATIPQ7Z7H3 387 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 KCNG4Q8TDN1 519 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 CLSTN2Q9H4D0 955 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 MCM9Q9NXL9 1143 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 SRGNP10124 158 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 NUP133Q8WUM0 1156 aa27.01■■□□□ 1.91
MSX2-201ENST00000239243 FTOQ9C0B1 505 aaKnown RBP eCLIP27.01■■□□□ 1.91
MSX2-201ENST00000239243 POLR3DP05423 398 aaPredicted RBP27■■□□□ 1.91
MSX2-201ENST00000239243 GNL2Q13823 731 aaKnown RBP27■■□□□ 1.91
MSX2-201ENST00000239243 TNS1Q9HBL0 1735 aaKnown RBP27■■□□□ 1.91
MSX2-201ENST00000239243 SMIM22K7EJ46 135 aa27■■□□□ 1.91
MSX2-201ENST00000239243 PRDM1O75626 825 aa27■■□□□ 1.91
MSX2-201ENST00000239243 DEXIO95424 95 aa27■■□□□ 1.91
MSX2-201ENST00000239243 ME1P48163 572 aa27■■□□□ 1.91
MSX2-201ENST00000239243 FAM43AQ8N2R8 423 aa27■■□□□ 1.91
MSX2-201ENST00000239243 AIFM3Q96NN9 605 aa27■■□□□ 1.91
MSX2-201ENST00000239243 GJB4Q9NTQ9 266 aa27■■□□□ 1.91
MSX2-201ENST00000239243 MKRN1Q9UHC7 482 aaKnown RBP27■■□□□ 1.91
MSX2-201ENST00000239243 STK38Q15208 465 aa26.99■■□□□ 1.91
MSX2-201ENST00000239243 RBM28Q9NW13 759 aaKnown RBP26.99■■□□□ 1.91
MSX2-201ENST00000239243 NR1I2O75469 434 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 DDAH1O94760 285 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 DIXDC1Q155Q3 683 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 CCDC73Q6ZRK6 1079 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 CRACR2BQ8N4Y2 399 aaPredicted RBP26.98■■□□□ 1.91
MSX2-201ENST00000239243 LINC00301Q8NCQ3 95 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 KIF28PB7ZC32 967 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 MMP10P09238 476 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 PLCG2P16885 1265 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 SF3A1Q15459 793 aaKnown RBP26.98■■□□□ 1.91
MSX2-201ENST00000239243 C12orf60Q5U649 245 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 RBM43Q6ZSC3 357 aaKnown RBP26.98■■□□□ 1.91
MSX2-201ENST00000239243 CCAR1Q8IX12 1150 aaKnown RBP26.98■■□□□ 1.91
MSX2-201ENST00000239243 SH3RF3Q8TEJ3 882 aaPredicted RBP26.98■■□□□ 1.91
MSX2-201ENST00000239243 TMX4Q9H1E5 349 aaPredicted RBP26.98■■□□□ 1.91
MSX2-201ENST00000239243 FAM205AQ6ZU69 1335 aa26.98■■□□□ 1.91
MSX2-201ENST00000239243 NBPF11Q86T75 865 aa26.97■■□□□ 1.91
MSX2-201ENST00000239243 PDLIM2Q96JY6 352 aa26.97■■□□□ 1.91
MSX2-201ENST00000239243 RTFDC1Q9BY42 306 aaPredicted RBP26.97■■□□□ 1.91
MSX2-201ENST00000239243 RNF26Q9BY78 433 aaPredicted RBP26.97■■□□□ 1.91
MSX2-201ENST00000239243 COA1Q9GZY4 146 aa26.97■■□□□ 1.91
MSX2-201ENST00000239243 ROBO3Q96MS0 1386 aa26.97■■□□□ 1.91
MSX2-201ENST00000239243 U2AF2P26368 475 aaKnown RBP eCLIP26.97■■□□□ 1.91
MSX2-201ENST00000239243 SAFBQ15424 915 aaKnown RBP eCLIP26.97■■□□□ 1.91
MSX2-201ENST00000239243 MFSD14BQ5SR56 506 aa26.97■■□□□ 1.91
MSX2-201ENST00000239243 ADALQ6DHV7 355 aa26.97■■□□□ 1.91
MSX2-201ENST00000239243 A0A1W2PQ27 194 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 A0A1W2PQ64 194 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 A0A1W2PQD8 194 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 GRIK5Q16478 980 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 FAM163AQ96GL9 167 aaPredicted RBP26.96■■□□□ 1.91
MSX2-201ENST00000239243 NAV1Q8NEY1 1877 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 CTAGE5O15320 804 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 CAMK4Q16566 473 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 ANO1Q5XXA6 986 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 MASTLQ96GX5 879 aa26.96■■□□□ 1.91
MSX2-201ENST00000239243 GPR75-ASB3A0A0A6YYF3 556 aa26.95■■□□□ 1.9
MSX2-201ENST00000239243 TSPY2A6NKD2 308 aa26.95■■□□□ 1.9
MSX2-201ENST00000239243 USP17L8P0C7I0 530 aa26.95■■□□□ 1.9
MSX2-201ENST00000239243 CYP2D6P10635 497 aa26.95■■□□□ 1.9
MSX2-201ENST00000239243 AKAP17AQ02040 695 aaKnown RBP26.95■■□□□ 1.9
MSX2-201ENST00000239243 SPTLC2O15270 562 aa26.94■■□□□ 1.9
MSX2-201ENST00000239243 FAM160A1Q05DH4 1040 aa26.94■■□□□ 1.9
MSX2-201ENST00000239243 PCDHA7Q9UN72 937 aa26.94■■□□□ 1.9
MSX2-201ENST00000239243 SUGT1Q9Y2Z0 365 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms