RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 GRIK5Q16478 980 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 LMBR1LQ6UX01 489 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 CCDC146Q8IYE0 955 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 ARRDC4Q8NCT1 418 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 GPRC5AQ8NFJ5 357 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 LPAR1Q92633 364 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 USP40Q9NVE5 1235 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 MROH5Q6ZUA9 1318 aa12.17□□□□□ -0.46
NDUFB3-201ENST00000237889 GLRX3O76003 335 aaKnown RBP12.17□□□□□ -0.46
NDUFB3-201ENST00000237889 CCND3P30281 292 aaPredicted RBP12.17□□□□□ -0.46
NDUFB3-201ENST00000237889 IRX3P78415 501 aaPredicted RBP12.17□□□□□ -0.46
NDUFB3-201ENST00000237889 TMEM31Q5JXX7 168 aa12.17□□□□□ -0.46
NDUFB3-201ENST00000237889 CDC42EP5Q6NZY7 148 aa12.17□□□□□ -0.46
NDUFB3-201ENST00000237889 WDR66Q8TBY9 1149 aa12.17□□□□□ -0.46
NDUFB3-201ENST00000237889 MORF4L1Q9UBU8 362 aa12.17□□□□□ -0.46
NDUFB3-201ENST00000237889 PIEZO1Q92508 2521 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 MYBBP1AQ9BQG0 1328 aaKnown RBP12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 ZNF853P0CG23 659 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 DNAJB2P25686 324 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 CNGA1P29973 690 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 FOXO4P98177 505 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 WDR43Q15061 677 aaKnown RBP eCLIP12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 TREML2Q5T2D2 321 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 ALYREFQ86V81 257 aaKnown RBP12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 TIFAQ96CG3 184 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 ASCC2Q9H1I8 757 aaPredicted RBP12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 DDX20Q9UHI6 824 aaKnown RBP12.16□□□□□ -0.46
NDUFB3-201ENST00000237889 KBTBD13C9JR72 458 aa12.15□□□□□ -0.46
NDUFB3-201ENST00000237889 ENTPD3O75355 529 aa12.15□□□□□ -0.46
NDUFB3-201ENST00000237889 NFIAQ12857 509 aa12.15□□□□□ -0.46
NDUFB3-201ENST00000237889 SPP2Q13103 211 aa12.15□□□□□ -0.46
NDUFB3-201ENST00000237889 SLC39A5Q6ZMH5 540 aa12.15□□□□□ -0.46
NDUFB3-201ENST00000237889 ZNF280CQ8ND82 737 aa12.15□□□□□ -0.46
NDUFB3-201ENST00000237889 DNAAF4Q8WXU2 420 aa12.15□□□□□ -0.46
NDUFB3-201ENST00000237889 TACC3Q9Y6A5 838 aa12.15□□□□□ -0.46
NDUFB3-201ENST00000237889 ALPK3Q96L96 1907 aa12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 MAP3K10Q02779 954 aa12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 FKBP5Q13451 457 aaPredicted RBP12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 CCDC174Q6PII3 467 aa12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 P2RX7Q99572 595 aaKnown RBP12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 APBA2Q99767 749 aa12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 ARAP2Q8WZ64 1704 aa12.14□□□□□ -0.47
NDUFB3-201ENST00000237889 IFIT1P09914 478 aaKnown RBP12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 IGFBP4P22692 258 aa12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 ATP2B2Q01814 1243 aa12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 EDC3Q96F86 508 aaKnown RBP12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 AS3MTQ9HBK9 375 aa12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 TMOD4Q9NZQ9 345 aa12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 DDX60LQ5H9U9 1706 aaKnown RBP12.13□□□□□ -0.47
NDUFB3-201ENST00000237889 RAG1P15918 1043 aa12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 HMGCS2P54868 508 aa12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 CCDC85BQ15834 202 aaPredicted RBP12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 METTL24Q5JXM2 366 aa12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 CCDC129Q6ZRS4 1044 aa12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 SLF2Q8IX21 1173 aa12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 IDI2Q9BXS1 227 aa12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 CXXC1Q9P0U4 656 aaPredicted RBP12.12□□□□□ -0.47
NDUFB3-201ENST00000237889 LDHBP07195 334 aaKnown RBP12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 RGS3P49796 1198 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 CCNA1P78396 465 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 FPGSQ05932 587 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 FLIIQ13045 1269 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 MAP2K5Q13163 448 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 CCL14Q16627 93 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 C1orf53Q5VUE5 145 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 GPR142Q7Z601 462 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 USP6NLQ92738 828 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 UTYO14607 1347 aa12.11□□□□□ -0.47
NDUFB3-201ENST00000237889 BDP1A6H8Y1 2624 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 TBC1D12O60347 775 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 GPR37L1O60883 481 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 PDE8BO95263 885 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 BMP1P13497 986 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 RALBP1Q15311 655 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 TRIM60Q495X7 471 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 MORN1Q5T089 497 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 GJC2Q5T442 439 aaPredicted RBP12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 PRDM12Q9H4Q4 367 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 GNL3LQ9NVN8 582 aaKnown RBP12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 MGAMO43451 1857 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 KIF16BQ96L93 1317 aa12.1□□□□□ -0.47
NDUFB3-201ENST00000237889 NCOR1O75376 2440 aa12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 TRIM43BA6NCK2 446 aa12.09□□□□□ -0.47
NDUFB3-201ENST00000237889 HERVK_113P62684 666 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms