RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 ST3GAL1Q11201 340 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 CUL4AQ13619 759 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 C12orf60Q5U649 245 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 BRF1Q92994 677 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 PRMT6Q96LA8 375 aaPredicted RBP11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 TOMM22Q9NS69 142 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 LTBP3Q9NS15 1303 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 LAMB1P07942 1786 aa11.94□□□□□ -0.5
PRAMEF4-201ENST00000235349 DICER1Q9UPY3 1922 aaKnown RBP11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 TIAM2Q8IVF5 1701 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 FLT1P17948 1338 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 KDM4AO75164 1064 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 CACNB3P54284 484 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 NFIAQ12857 509 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 TRDNQ13061 729 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 STK3Q13188 491 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 PICALMQ13492 652 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 CIAPIN1Q6FI81 312 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 ZFPM1Q8IX07 1006 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 AGXT2Q9BYV1 514 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 SERPINA10Q9UK55 444 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 POLR3DP05423 398 aaPredicted RBP11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 FGRP09769 529 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 FGD1P98174 961 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 IGDCC4Q8TDY8 1250 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 ZKSCAN3Q9BRR0 538 aa11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 TDRD3Q9H7E2 651 aaKnown RBP11.93□□□□□ -0.5
PRAMEF4-201ENST00000235349 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
PRAMEF4-201ENST00000235349 CERS3Q8IU89 383 aa11.92□□□□□ -0.5
PRAMEF4-201ENST00000235349 CCDC83Q8IWF9 413 aa11.92□□□□□ -0.5
PRAMEF4-201ENST00000235349 ZSCAN31Q96LW9 406 aaPredicted RBP11.92□□□□□ -0.5
PRAMEF4-201ENST00000235349 KRT23Q9C075 422 aa11.92□□□□□ -0.5
PRAMEF4-201ENST00000235349 ARPP21Q9UBL0 812 aaPredicted RBP11.92□□□□□ -0.5
PRAMEF4-201ENST00000235349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
PRAMEF4-201ENST00000235349 FZD9O00144 591 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 RANBP6O60518 1105 aaKnown RBP11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 SLURP2P0DP57 97 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 KLHL40Q2TBA0 621 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 MTERF4Q7Z6M4 381 aaKnown RBP11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 ZSCAN30Q86W11 494 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 SLC44A5Q8NCS7 719 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 RNF41Q9H4P4 317 aaPredicted RBP11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 CNNM2Q9H8M5 875 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 MYO3BQ8WXR4 1341 aa11.91□□□□□ -0.5
PRAMEF4-201ENST00000235349 OFD1O75665 1012 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 TCP10Q12799 353 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 TNIP1Q15025 636 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 FAM47AQ5JRC9 791 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 FBXL16Q8N461 479 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 GJA3Q9Y6H8 435 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 WDR19Q8NEZ3 1342 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 ZNF541Q9H0D2 1346 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 SH2B2O14492 632 aaPredicted RBP11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 IFIT3O14879 490 aaKnown RBP11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 ORC4O43929 436 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 LY9Q9HBG7 655 aa11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 SH2B1Q9NRF2 756 aaPredicted RBP11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 NAP1L2Q9ULW6 460 aaPredicted RBP11.9□□□□□ -0.5
PRAMEF4-201ENST00000235349 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 NMT2O60551 498 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 LMNB1P20700 586 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 CDK8P49336 464 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 GMPSP49915 693 aaPredicted RBP11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 ZNF445P59923 1031 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 NUCB2P80303 420 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 DLGAP5Q15398 846 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 SH3BP5LQ7L8J4 393 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 OGFOD1Q8N543 542 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 INTS4Q96HW7 963 aaKnown RBP11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 NCOA5Q9HCD5 579 aaKnown RBP11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 HDAC9Q9UKV0 1011 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 MYH8P13535 1937 aa11.89□□□□□ -0.51
PRAMEF4-201ENST00000235349 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 KLF18A0A0U1RQI7 1052 aa11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 CLRN2A0PK11 232 aa11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 PFKFB2O60825 505 aa11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 EGFRP00533 1210 aa11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 SLC3A2P08195 630 aaKnown RBP11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 EVCP57679 992 aa11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 PDE4BQ07343 736 aa11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 SCRN1Q12765 414 aa11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 NBPF9Q3BBW0 867 aa11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 SMAP1Q8IYB5 467 aaPredicted RBP11.88□□□□□ -0.51
PRAMEF4-201ENST00000235349 ESR2Q92731 530 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms