RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 CRNKL1Q9BZJ0 848 aaKnown RBP18.61■□□□□ 0.57
ITGA4-201ENST00000233573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
ITGA4-201ENST00000233573 KIF28PB7ZC32 967 aa18.6■□□□□ 0.57
ITGA4-201ENST00000233573 USP17L12C9JPN9 530 aa18.6■□□□□ 0.57
ITGA4-201ENST00000233573 USP17L21D6R901 530 aa18.6■□□□□ 0.57
ITGA4-201ENST00000233573 IL1R1P14778 569 aa18.6■□□□□ 0.57
ITGA4-201ENST00000233573 STYK1Q6J9G0 422 aa18.6■□□□□ 0.57
ITGA4-201ENST00000233573 CPLX2Q6PUV4 134 aaKnown RBP18.6■□□□□ 0.57
ITGA4-201ENST00000233573 PHKBQ93100 1093 aa18.6■□□□□ 0.57
ITGA4-201ENST00000233573 ATP8A2Q9NTI2 1148 aa18.6■□□□□ 0.57
ITGA4-201ENST00000233573 GOLGA6L4A6NEF3 574 aa18.59■□□□□ 0.57
ITGA4-201ENST00000233573 IFNAR1P17181 557 aa18.59■□□□□ 0.57
ITGA4-201ENST00000233573 KIF23Q02241 960 aaPredicted RBP18.59■□□□□ 0.57
ITGA4-201ENST00000233573 CEBPZQ03701 1054 aaKnown RBP18.59■□□□□ 0.57
ITGA4-201ENST00000233573 BRAPQ7Z569 592 aa18.59■□□□□ 0.57
ITGA4-201ENST00000233573 DZIP1Q86YF9 867 aaKnown RBP18.59■□□□□ 0.57
ITGA4-201ENST00000233573 RNF214Q8ND24 703 aa18.59■□□□□ 0.57
ITGA4-201ENST00000233573 ALG1Q9BT22 464 aa18.59■□□□□ 0.57
ITGA4-201ENST00000233573 DACT1Q9NYF0 836 aa18.59■□□□□ 0.57
ITGA4-201ENST00000233573 RTEL1Q9NZ71 1219 aa18.59■□□□□ 0.57
ITGA4-201ENST00000233573 SBK1Q52WX2 424 aa18.59■□□□□ 0.57
ITGA4-201ENST00000233573 RBM43Q6ZSC3 357 aaKnown RBP18.59■□□□□ 0.57
ITGA4-201ENST00000233573 DDX19AQ9NUU7 478 aaKnown RBP18.59■□□□□ 0.57
ITGA4-201ENST00000233573 MKRN1Q9UHC7 482 aaKnown RBP18.59■□□□□ 0.57
ITGA4-201ENST00000233573 C10orf71Q711Q0 1435 aa18.58■□□□□ 0.57
ITGA4-201ENST00000233573 ERICH2A1L162 156 aa18.58■□□□□ 0.57
ITGA4-201ENST00000233573 ZBTB7AO95365 584 aa18.58■□□□□ 0.57
ITGA4-201ENST00000233573 FMNL1O95466 1100 aaPredicted RBP18.58■□□□□ 0.57
ITGA4-201ENST00000233573 LDHBP07195 334 aaKnown RBP18.58■□□□□ 0.57
ITGA4-201ENST00000233573 IARSP41252 1262 aaKnown RBP18.58■□□□□ 0.57
ITGA4-201ENST00000233573 EVX2Q03828 476 aa18.58■□□□□ 0.57
ITGA4-201ENST00000233573 DIXDC1Q155Q3 683 aa18.58■□□□□ 0.57
ITGA4-201ENST00000233573 FAM43AQ8N2R8 423 aa18.58■□□□□ 0.57
ITGA4-201ENST00000233573 NUP62CLQ9H1M0 184 aa18.58■□□□□ 0.57
ITGA4-201ENST00000233573 TNKSO95271 1327 aa18.58■□□□□ 0.56
ITGA4-201ENST00000233573 ORC4O43929 436 aa18.58■□□□□ 0.56
ITGA4-201ENST00000233573 NR1I2O75469 434 aa18.58■□□□□ 0.56
ITGA4-201ENST00000233573 DOK7Q18PE1 504 aa18.58■□□□□ 0.56
ITGA4-201ENST00000233573 MYSM1Q5VVJ2 828 aa18.58■□□□□ 0.56
ITGA4-201ENST00000233573 SYNE3Q6ZMZ3 975 aa18.58■□□□□ 0.56
ITGA4-201ENST00000233573 ZNF654Q8IZM8 581 aa18.58■□□□□ 0.56
ITGA4-201ENST00000233573 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.56
ITGA4-201ENST00000233573 UBAC1Q9BSL1 405 aa18.58■□□□□ 0.56
ITGA4-201ENST00000233573 UBE2Q2LH0YL09 131 aa18.57■□□□□ 0.56
ITGA4-201ENST00000233573 KRT40Q6A162 431 aa18.57■□□□□ 0.56
ITGA4-201ENST00000233573 NBPF11Q86T75 865 aa18.57■□□□□ 0.56
ITGA4-201ENST00000233573 ENAHQ8N8S7 591 aaPredicted RBP18.57■□□□□ 0.56
ITGA4-201ENST00000233573 ZSCAN10Q96SZ4 725 aaPredicted RBP18.57■□□□□ 0.56
ITGA4-201ENST00000233573 CLSTN2Q9H4D0 955 aa18.57■□□□□ 0.56
ITGA4-201ENST00000233573 POLR3EQ9NVU0 708 aa18.57■□□□□ 0.56
ITGA4-201ENST00000233573 RTN1Q16799 776 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 CCDC125Q86Z20 511 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 BICD2Q8TD16 824 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 ZC3H12CQ9C0D7 883 aaKnown RBP18.56■□□□□ 0.56
ITGA4-201ENST00000233573 TMX4Q9H1E5 349 aaPredicted RBP18.56■□□□□ 0.56
ITGA4-201ENST00000233573 ARPP21Q9UBL0 812 aaPredicted RBP18.56■□□□□ 0.56
ITGA4-201ENST00000233573 POLR3DP05423 398 aaPredicted RBP18.56■□□□□ 0.56
ITGA4-201ENST00000233573 PPP4CP60510 307 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 GTF2IP78347 998 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 UVSSAQ2YD98 709 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 LINC00301Q8NCQ3 95 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 CDK5RAP2Q96SN8 1893 aa18.56■□□□□ 0.56
ITGA4-201ENST00000233573 PRDM1O75626 825 aa18.55■□□□□ 0.56
ITGA4-201ENST00000233573 SSRP1Q08945 709 aaKnown RBP18.55■□□□□ 0.56
ITGA4-201ENST00000233573 MAP3K11Q16584 847 aa18.55■□□□□ 0.56
ITGA4-201ENST00000233573 MFSD14BQ5SR56 506 aa18.55■□□□□ 0.56
ITGA4-201ENST00000233573 FBXW7Q969H0 707 aa18.55■□□□□ 0.56
ITGA4-201ENST00000233573 CNKSR1Q969H4 720 aa18.55■□□□□ 0.56
ITGA4-201ENST00000233573 SLC26A6Q9BXS9 759 aa18.55■□□□□ 0.56
ITGA4-201ENST00000233573 CLIC4Q9Y696 253 aa18.55■□□□□ 0.56
ITGA4-201ENST00000233573 YEATS4O95619 227 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 CYP2D6P10635 497 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 GSTO1P78417 241 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 CAMK4Q16566 473 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 GOLPH3LQ9H4A5 285 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 U2AF2P26368 475 aaKnown RBP eCLIP18.54■□□□□ 0.56
ITGA4-201ENST00000233573 GUCY1A2P33402 732 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 PPP2R5BQ15173 497 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 CRACR2BQ8N4Y2 399 aaPredicted RBP18.54■□□□□ 0.56
ITGA4-201ENST00000233573 ENGASEQ8NFI3 743 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 SLC16A10Q8TF71 515 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 C7orf43Q8WVR3 580 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 MXD3Q9BW11 206 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 COA1Q9GZY4 146 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 PCDHA7Q9UN72 937 aa18.54■□□□□ 0.56
ITGA4-201ENST00000233573 ATF5Q9Y2D1 282 aaPredicted RBP18.54■□□□□ 0.56
ITGA4-201ENST00000233573 CCDC196A0A1B0GTZ2 297 aa18.53■□□□□ 0.56
ITGA4-201ENST00000233573 SNW1Q13573 536 aaKnown RBP18.53■□□□□ 0.56
ITGA4-201ENST00000233573 CCAR1Q8IX12 1150 aaKnown RBP18.53■□□□□ 0.56
ITGA4-201ENST00000233573 SH3RF3Q8TEJ3 882 aaPredicted RBP18.53■□□□□ 0.56
ITGA4-201ENST00000233573 RTFDC1Q9BY42 306 aaPredicted RBP18.53■□□□□ 0.56
ITGA4-201ENST00000233573 TNMDQ9H2S6 317 aa18.53■□□□□ 0.56
ITGA4-201ENST00000233573 DBNDD1Q9H9R9 158 aa18.53■□□□□ 0.56
ITGA4-201ENST00000233573 NAV1Q8NEY1 1877 aa18.53■□□□□ 0.56
ITGA4-201ENST00000233573 MROH7-TTC4A0A0A0MT08 1334 aa18.53■□□□□ 0.56
ITGA4-201ENST00000233573 ADALQ6DHV7 355 aa18.53■□□□□ 0.56
ITGA4-201ENST00000233573 IQCA1Q86XH1 822 aa18.53■□□□□ 0.56
ITGA4-201ENST00000233573 WASF1Q92558 559 aa18.53■□□□□ 0.56
ITGA4-201ENST00000233573 RRAGDQ9NQL2 400 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms