RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 FAM217BQ9NTX9 383 aaPredicted RBP19.56■□□□□ 0.72
GAPDH-201ENST00000229239 IQSEC3Q9UPP2 1182 aaPredicted RBP19.56■□□□□ 0.72
GAPDH-201ENST00000229239 SSRP1Q08945 709 aaKnown RBP19.55■□□□□ 0.72
GAPDH-201ENST00000229239 SNW1Q13573 536 aaKnown RBP19.55■□□□□ 0.72
GAPDH-201ENST00000229239 PRR5LQ6MZQ0 368 aa19.55■□□□□ 0.72
GAPDH-201ENST00000229239 RAB11FIP4Q86YS3 637 aa19.55■□□□□ 0.72
GAPDH-201ENST00000229239 CKAP2LQ8IYA6 745 aa19.55■□□□□ 0.72
GAPDH-201ENST00000229239 FTOQ9C0B1 505 aaKnown RBP eCLIP19.55■□□□□ 0.72
GAPDH-201ENST00000229239 PCDHA7Q9UN72 937 aa19.55■□□□□ 0.72
GAPDH-201ENST00000229239 TACC3Q9Y6A5 838 aa19.55■□□□□ 0.72
GAPDH-201ENST00000229239 NPHP1O15259 732 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 FGRP09769 529 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 SF3A1Q15459 793 aaKnown RBP19.54■□□□□ 0.72
GAPDH-201ENST00000229239 KRT40Q6A162 431 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 OTUD7BQ6GQQ9 843 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 UBAC1Q9BSL1 405 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 SENP2Q9HC62 589 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 GOLGA6L6A8MZA4 724 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 SPTLC2O15270 562 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 RTN1Q16799 776 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 ANO1Q5XXA6 986 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 TRIM22Q8IYM9 498 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 JMYQ8N9B5 988 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 FSIP1Q8NA03 581 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 CNBD1Q8NA66 436 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 NSUN4Q96CB9 384 aaKnown RBP19.54■□□□□ 0.72
GAPDH-201ENST00000229239 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.54■□□□□ 0.72
GAPDH-201ENST00000229239 LEMD3Q9Y2U8 911 aa19.54■□□□□ 0.72
GAPDH-201ENST00000229239 MAST2Q6P0Q8 1798 aa19.53■□□□□ 0.72
GAPDH-201ENST00000229239 U2AF2P26368 475 aaKnown RBP eCLIP19.53■□□□□ 0.72
GAPDH-201ENST00000229239 ANO6Q4KMQ2 910 aa19.53■□□□□ 0.72
GAPDH-201ENST00000229239 SPTY2D1Q68D10 685 aaPredicted RBP19.53■□□□□ 0.72
GAPDH-201ENST00000229239 GOLPH3LQ9H4A5 285 aa19.53■□□□□ 0.72
GAPDH-201ENST00000229239 INCENPQ9NQS7 918 aa19.53■□□□□ 0.72
GAPDH-201ENST00000229239 TOMM22Q9NS69 142 aa19.53■□□□□ 0.72
GAPDH-201ENST00000229239 ARFGEF1Q9Y6D6 1849 aa19.53■□□□□ 0.72
GAPDH-201ENST00000229239 POLR3DP05423 398 aaPredicted RBP19.52■□□□□ 0.72
GAPDH-201ENST00000229239 DALRD3Q5D0E6 543 aaKnown RBP19.52■□□□□ 0.72
GAPDH-201ENST00000229239 RRP12Q5JTH9 1297 aaKnown RBP19.52■□□□□ 0.72
GAPDH-201ENST00000229239 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.52■□□□□ 0.72
GAPDH-201ENST00000229239 FMR1NBQ8N0W7 255 aaPredicted RBP19.52■□□□□ 0.72
GAPDH-201ENST00000229239 CCDC24Q8N4L8 307 aa19.52■□□□□ 0.72
GAPDH-201ENST00000229239 TDRD7Q8NHU6 1098 aaKnown RBP19.52■□□□□ 0.72
GAPDH-201ENST00000229239 CLIC4Q9Y696 253 aa19.52■□□□□ 0.72
GAPDH-201ENST00000229239 IRS2Q9Y4H2 1338 aa19.52■□□□□ 0.72
GAPDH-201ENST00000229239 TAF1P21675 1872 aa19.52■□□□□ 0.72
GAPDH-201ENST00000229239 KIF28PB7ZC32 967 aa19.52■□□□□ 0.71
GAPDH-201ENST00000229239 RANBP6O60518 1105 aaKnown RBP19.52■□□□□ 0.71
GAPDH-201ENST00000229239 GRAPQ13588 217 aa19.52■□□□□ 0.71
GAPDH-201ENST00000229239 SLC39A14Q15043 492 aa19.52■□□□□ 0.71
GAPDH-201ENST00000229239 STX1AQ16623 288 aa19.52■□□□□ 0.71
GAPDH-201ENST00000229239 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.71
GAPDH-201ENST00000229239 SDR42E1Q8WUS8 393 aa19.52■□□□□ 0.71
GAPDH-201ENST00000229239 CBX8Q9HC52 389 aa19.52■□□□□ 0.71
GAPDH-201ENST00000229239 H0YIN7 160 aa19.51■□□□□ 0.71
GAPDH-201ENST00000229239 PPP6R2O75170 966 aa19.51■□□□□ 0.71
GAPDH-201ENST00000229239 RXRAP19793 462 aa19.51■□□□□ 0.71
GAPDH-201ENST00000229239 PDE6BP35913 854 aa19.51■□□□□ 0.71
GAPDH-201ENST00000229239 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
GAPDH-201ENST00000229239 C15orf52Q6ZUT6 534 aaKnown RBP19.51■□□□□ 0.71
GAPDH-201ENST00000229239 C2CD5Q86YS7 1000 aa19.51■□□□□ 0.71
GAPDH-201ENST00000229239 PHKBQ93100 1093 aa19.51■□□□□ 0.71
GAPDH-201ENST00000229239 CRNKL1Q9BZJ0 848 aaKnown RBP19.51■□□□□ 0.71
GAPDH-201ENST00000229239 ATP8A2Q9NTI2 1148 aa19.51■□□□□ 0.71
GAPDH-201ENST00000229239 DUOX1Q9NRD9 1551 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 MINDY4BA8MYZ0 360 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 DEXIO95424 95 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 ST5P78524 1137 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 MECOMQ03112 1051 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 SAFBQ15424 915 aaKnown RBP eCLIP19.5■□□□□ 0.71
GAPDH-201ENST00000229239 SEC23AQ15436 765 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 ZNF654Q8IZM8 581 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 SLC26A6Q9BXS9 759 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 WTIPA6NIX2 430 aaPredicted RBP19.5■□□□□ 0.71
GAPDH-201ENST00000229239 OFD1O75665 1012 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 CMA1P23946 247 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 ZNF165P49910 485 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 KIAA2012Q0VF49 1180 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 FANCBQ8NB91 859 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 ZNF384Q8TF68 577 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 ANO10Q9NW15 660 aa19.5■□□□□ 0.71
GAPDH-201ENST00000229239 DLEC1Q9Y238 1755 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 ORC4O43929 436 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 SLC3A2P08195 630 aaKnown RBP19.49■□□□□ 0.71
GAPDH-201ENST00000229239 CALM1P0DP23 149 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 CALM2P0DP24 149 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 CALM3P0DP25 149 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 ARHGAP27Q6ZUM4 889 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.49■□□□□ 0.71
GAPDH-201ENST00000229239 IQCA1Q86XH1 822 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 CCDC144CPQ8IYA2 1237 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 WDR66Q8TBY9 1149 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 MYL10Q9BUA6 226 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 NAT10Q9H0A0 1025 aaKnown RBP19.49■□□□□ 0.71
GAPDH-201ENST00000229239 ARPP21Q9UBL0 812 aaPredicted RBP19.49■□□□□ 0.71
GAPDH-201ENST00000229239 MYH13Q9UKX3 1938 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 TNRC6CQ9HCJ0 1690 aaKnown RBP19.49■□□□□ 0.71
GAPDH-201ENST00000229239 TNKSO95271 1327 aa19.49■□□□□ 0.71
GAPDH-201ENST00000229239 KLRK1P26718 216 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms