RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 SMTNL1A8MU46 457 aa28.82■■■□□ 2.2
RUNDC3A-201ENST00000225441 ATP2B4P23634 1241 aa28.82■■■□□ 2.2
RUNDC3A-201ENST00000225441 CMA1P23946 247 aa28.82■■■□□ 2.2
RUNDC3A-201ENST00000225441 CHRNA5P30532 468 aa28.82■■■□□ 2.2
RUNDC3A-201ENST00000225441 ZRSR1Q15695 479 aaKnown RBP28.82■■■□□ 2.2
RUNDC3A-201ENST00000225441 NRBP1Q9UHY1 535 aa28.82■■■□□ 2.2
RUNDC3A-201ENST00000225441 ANO1Q5XXA6 986 aa28.81■■■□□ 2.2
RUNDC3A-201ENST00000225441 VPS37DQ86XT2 251 aa28.81■■■□□ 2.2
RUNDC3A-201ENST00000225441 LRRC8AQ8IWT6 810 aa28.81■■■□□ 2.2
RUNDC3A-201ENST00000225441 CACTINQ8WUQ7 758 aaKnown RBP28.81■■■□□ 2.2
RUNDC3A-201ENST00000225441 KIF23Q02241 960 aaPredicted RBP28.8■■■□□ 2.2
RUNDC3A-201ENST00000225441 GGA1Q9UJY5 639 aa28.8■■■□□ 2.2
RUNDC3A-201ENST00000225441 ATF5Q9Y2D1 282 aaPredicted RBP28.8■■■□□ 2.2
RUNDC3A-201ENST00000225441 LTBP1Q14766 1721 aa28.8■■■□□ 2.2
RUNDC3A-201ENST00000225441 UFL1O94874 794 aa28.8■■■□□ 2.2
RUNDC3A-201ENST00000225441 SLC9C2Q5TAH2 1124 aa28.8■■■□□ 2.2
RUNDC3A-201ENST00000225441 JMYQ8N9B5 988 aa28.8■■■□□ 2.2
RUNDC3A-201ENST00000225441 CCDC94Q9BW85 323 aaPredicted RBP28.8■■■□□ 2.2
RUNDC3A-201ENST00000225441 SH2B2O14492 632 aaPredicted RBP28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 RIOK3O14730 519 aaKnown RBP28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 POLD1P28340 1107 aa28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 HIBADHP31937 336 aaKnown RBP28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 TPM4P67936 248 aa28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 C15orf52Q6ZUT6 534 aaKnown RBP28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 TXNRD3Q86VQ6 643 aa28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 GPHNQ9NQX3 736 aaPredicted RBP28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 CLIC4Q9Y696 253 aa28.79■■■□□ 2.2
RUNDC3A-201ENST00000225441 LRMPQ12912 555 aa28.78■■■□□ 2.2
RUNDC3A-201ENST00000225441 SLC39A14Q15043 492 aa28.78■■■□□ 2.2
RUNDC3A-201ENST00000225441 CNKSR1Q969H4 720 aa28.78■■■□□ 2.2
RUNDC3A-201ENST00000225441 PIH1D3Q9NQM4 214 aaKnown RBP28.78■■■□□ 2.2
RUNDC3A-201ENST00000225441 PPP6R2O75170 966 aa28.78■■■□□ 2.2
RUNDC3A-201ENST00000225441 NDUFA8P51970 172 aa28.78■■■□□ 2.2
RUNDC3A-201ENST00000225441 SGMS1Q86VZ5 419 aa28.78■■■□□ 2.2
RUNDC3A-201ENST00000225441 IQSEC3Q9UPP2 1182 aaPredicted RBP28.78■■■□□ 2.2
RUNDC3A-201ENST00000225441 SEMA3EO15041 775 aa28.77■■■□□ 2.2
RUNDC3A-201ENST00000225441 CCDC144BQ3MJ40 725 aa28.77■■■□□ 2.2
RUNDC3A-201ENST00000225441 CCDC144CPQ8IYA2 1237 aa28.77■■■□□ 2.2
RUNDC3A-201ENST00000225441 TBC1D16Q8TBP0 767 aa28.77■■■□□ 2.2
RUNDC3A-201ENST00000225441 MTA3Q9BTC8 594 aa28.77■■■□□ 2.2
RUNDC3A-201ENST00000225441 OSBPL5Q9H0X9 879 aaPredicted RBP28.77■■■□□ 2.2
RUNDC3A-201ENST00000225441 CACNA1SQ13698 1873 aa28.77■■■□□ 2.2
RUNDC3A-201ENST00000225441 FAM237AA0A1B0GTK4 181 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 PSDA5PKW4 1024 aaPredicted RBP28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 METAP2P50579 478 aaKnown RBP eCLIP28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 NLRP12P59046 1061 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 ZNF710Q8N1W2 664 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 STK36Q9NRP7 1315 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 KIF13BQ9NQT8 1826 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 COL1A1P02452 1464 aaPredicted RBP28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 ZBTB22O15209 634 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 SLC3A2P08195 630 aaKnown RBP28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 AXDND1Q5T1B0 1012 aaPredicted RBP28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 NBPF3Q9H094 633 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 TMX4Q9H1E5 349 aaPredicted RBP28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 POLLQ9UGP5 575 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 DENND2AQ9ULE3 1009 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 DLEC1Q9Y238 1755 aa28.76■■■□□ 2.19
RUNDC3A-201ENST00000225441 A0A1B0GVL5 298 aa28.75■■■□□ 2.19
RUNDC3A-201ENST00000225441 KIF2AO00139 706 aaPredicted RBP28.75■■■□□ 2.19
RUNDC3A-201ENST00000225441 LIFRP42702 1097 aa28.75■■■□□ 2.19
RUNDC3A-201ENST00000225441 ANKRD7Q92527 254 aa28.75■■■□□ 2.19
RUNDC3A-201ENST00000225441 GPR101Q96P66 508 aaPredicted RBP28.75■■■□□ 2.19
RUNDC3A-201ENST00000225441 NID2Q14112 1375 aa28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 MYO1BO43795 1136 aa28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 ZNF202O95125 648 aa28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 TNNT1P13805 278 aa28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 PDE6AP16499 860 aa28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 OLFM4Q6UX06 510 aa28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 ELOA2Q8IYF1 753 aaPredicted RBP28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 AOPEPQ8N6M6 819 aa28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 CNNM2Q9H8M5 875 aa28.74■■■□□ 2.19
RUNDC3A-201ENST00000225441 TCRBV5S4A2TA0A5A2 114 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 POLR3DP05423 398 aaPredicted RBP28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 ALG1Q9BT22 464 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 PDS5AQ29RF7 1337 aaKnown RBP28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 SLX4Q8IY92 1834 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 C6orf229H3BNL8 230 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 IKBKBO14920 756 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 KCNJ6P48051 423 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 TPD52L1Q16890 204 aaPredicted RBP28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 APOA5Q6Q788 366 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 ZNF804AQ7Z570 1209 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 WASF1Q92558 559 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 STRBPQ96SI9 672 aaKnown RBP28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 ZNF532Q9HCE3 1301 aa28.73■■■□□ 2.19
RUNDC3A-201ENST00000225441 DUOX1Q9NRD9 1551 aa28.72■■■□□ 2.19
RUNDC3A-201ENST00000225441 DOCK2Q92608 1830 aa28.72■■■□□ 2.19
RUNDC3A-201ENST00000225441 PATL2C9JE40 543 aaKnown RBP28.72■■■□□ 2.19
RUNDC3A-201ENST00000225441 IDH1O75874 414 aaKnown RBP28.72■■■□□ 2.19
RUNDC3A-201ENST00000225441 OTUD7BQ6GQQ9 843 aa28.72■■■□□ 2.19
RUNDC3A-201ENST00000225441 TBC1D10CQ8IV04 446 aa28.72■■■□□ 2.19
RUNDC3A-201ENST00000225441 NEDD4P46934 1319 aa28.72■■■□□ 2.19
RUNDC3A-201ENST00000225441 DPP8Q6V1X1 898 aaPredicted RBP28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 CCDC150Q8NCX0 1101 aa28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 ZBTB43O43298 467 aa28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 TUBB4AP04350 444 aa28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 GNAT2P19087 354 aa28.71■■■□□ 2.19
RUNDC3A-201ENST00000225441 U2AF2P26368 475 aaKnown RBP eCLIP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms