RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
SEC61B-201ENST00000223641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEC61B-201ENST00000223641 C16orf86Q6ZW13 317 aa16.66■□□□□ 0.26
SEC61B-201ENST00000223641 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
SEC61B-201ENST00000223641 TMEM39BQ9GZU3 492 aa16.66■□□□□ 0.26
SEC61B-201ENST00000223641 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
SEC61B-201ENST00000223641 PPP2R3BQ9Y5P8 575 aa16.66■□□□□ 0.26
SEC61B-201ENST00000223641 ORC4O43929 436 aa16.65■□□□□ 0.26
SEC61B-201ENST00000223641 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
SEC61B-201ENST00000223641 NT5C2P49902 561 aa16.65■□□□□ 0.26
SEC61B-201ENST00000223641 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
SEC61B-201ENST00000223641 RNF41Q9H4P4 317 aaPredicted RBP16.65■□□□□ 0.26
SEC61B-201ENST00000223641 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
SEC61B-201ENST00000223641 TSHZ2Q9NRE2 1034 aa16.65■□□□□ 0.26
SEC61B-201ENST00000223641 SERPINB13Q9UIV8 391 aa16.65■□□□□ 0.26
SEC61B-201ENST00000223641 TBC1D12O60347 775 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 SLC3A2P08195 630 aaKnown RBP16.64■□□□□ 0.25
SEC61B-201ENST00000223641 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
SEC61B-201ENST00000223641 IL27Q8NEV9 243 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 DCPSQ96C86 337 aaKnown RBP16.64■□□□□ 0.25
SEC61B-201ENST00000223641 DYNLL2Q96FJ2 89 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 NEK1Q96PY6 1258 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 DNAJC18Q9H819 358 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 CNNM2Q9H8M5 875 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 INCENPQ9NQS7 918 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 SWAP70Q9UH65 585 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
SEC61B-201ENST00000223641 MYH8P13535 1937 aa16.64■□□□□ 0.25
SEC61B-201ENST00000223641 PSMA5P28066 241 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 CDK8P49336 464 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 PDE4BQ07343 736 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 ZSCAN29Q8IWY8 852 aaPredicted RBP16.63■□□□□ 0.25
SEC61B-201ENST00000223641 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 MB21D2Q8IYB1 491 aaPredicted RBP16.63■□□□□ 0.25
SEC61B-201ENST00000223641 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 NKX2-3Q8TAU0 364 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 NMRK2Q9NPI5 230 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
SEC61B-201ENST00000223641 NEDD4P46934 1319 aa16.63■□□□□ 0.25
SEC61B-201ENST00000223641 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
SEC61B-201ENST00000223641 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
SEC61B-201ENST00000223641 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
SEC61B-201ENST00000223641 SLC44A5Q8NCS7 719 aa16.62■□□□□ 0.25
SEC61B-201ENST00000223641 JAKMIP1Q96N16 626 aaKnown RBP16.62■□□□□ 0.25
SEC61B-201ENST00000223641 KRT23Q9C075 422 aa16.62■□□□□ 0.25
SEC61B-201ENST00000223641 ZNF287Q9HBT7 754 aa16.62■□□□□ 0.25
SEC61B-201ENST00000223641 POTEIP0CG38 1075 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 SLURP2P0DP57 97 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
SEC61B-201ENST00000223641 RASA1P20936 1047 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 SHMT1P34896 483 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 EXOSC10Q01780 885 aaKnown RBP16.61■□□□□ 0.25
SEC61B-201ENST00000223641 TRDNQ13061 729 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 RABEP1Q15276 862 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 NBPF12Q5TAG4 269 aaPredicted RBP16.61■□□□□ 0.25
SEC61B-201ENST00000223641 RUFY3Q7L099 469 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
SEC61B-201ENST00000223641 SULF1Q8IWU6 871 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 FBXL16Q8N461 479 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 WDR19Q8NEZ3 1342 aa16.61■□□□□ 0.25
SEC61B-201ENST00000223641 GREB1LQ9C091 1923 aaPredicted RBP16.6■□□□□ 0.25
SEC61B-201ENST00000223641 B4E1Z4 1266 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 BLOC1S2Q6QNY1 142 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 CDC37L1Q7L3B6 337 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 KRT26Q7Z3Y9 468 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 RALYLQ86SE5 291 aaKnown RBP16.6■□□□□ 0.25
SEC61B-201ENST00000223641 LDHDQ86WU2 507 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 STK11IPQ8N1F8 1099 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 ESR2Q92731 530 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 TTC14Q96N46 770 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 MTA3Q9BTC8 594 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 ALDH8A1Q9H2A2 487 aaPredicted RBP16.6■□□□□ 0.25
SEC61B-201ENST00000223641 SSC5DA1L4H1 1573 aa16.6■□□□□ 0.25
SEC61B-201ENST00000223641 KDM4AO75164 1064 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 PRDM1O75626 825 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 CPA1P15085 419 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 MCM5P33992 734 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 ANTXR2P58335 489 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 CYB5R4Q7L1T6 521 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 CRACR2BQ8N4Y2 399 aaPredicted RBP16.59■□□□□ 0.25
SEC61B-201ENST00000223641 HOOK2Q96ED9 719 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 AGXT2Q9BYV1 514 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
SEC61B-201ENST00000223641 MKNK2Q9HBH9 465 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 CYP46A1Q9Y6A2 500 aa16.59■□□□□ 0.25
SEC61B-201ENST00000223641 FAM196BA6NMK8 535 aa16.58■□□□□ 0.24
SEC61B-201ENST00000223641 ADM5C9JUS6 153 aa16.58■□□□□ 0.24
SEC61B-201ENST00000223641 SUPT20HL1Q3ZLR7 823 aa16.58■□□□□ 0.24
SEC61B-201ENST00000223641 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
SEC61B-201ENST00000223641 ZNF444Q8N0Y2 327 aaPredicted RBP16.58■□□□□ 0.24
SEC61B-201ENST00000223641 ZNF526Q8TF50 670 aaPredicted RBP16.58■□□□□ 0.24
SEC61B-201ENST00000223641 CCDC17Q96LX7 622 aa16.58■□□□□ 0.24
SEC61B-201ENST00000223641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.58■□□□□ 0.24
SEC61B-201ENST00000223641 PLIN4Q96Q06 1357 aa16.58■□□□□ 0.24
SEC61B-201ENST00000223641 PHF20L1A8MW92 1017 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms