RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 PPIL2Q13356 520 aa16.47■□□□□ 0.23
UPK1A-201ENST00000222275 DCAF15Q66K64 600 aa16.47■□□□□ 0.23
UPK1A-201ENST00000222275 CCDC84Q86UT8 332 aaPredicted RBP16.47■□□□□ 0.23
UPK1A-201ENST00000222275 CERS3Q8IU89 383 aa16.47■□□□□ 0.23
UPK1A-201ENST00000222275 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
UPK1A-201ENST00000222275 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
UPK1A-201ENST00000222275 MAP4K4O95819 1239 aaPredicted RBP16.46■□□□□ 0.23
UPK1A-201ENST00000222275 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
UPK1A-201ENST00000222275 PPATQ06203 517 aa16.46■□□□□ 0.23
UPK1A-201ENST00000222275 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
UPK1A-201ENST00000222275 NAA16Q6N069 864 aaPredicted RBP16.46■□□□□ 0.23
UPK1A-201ENST00000222275 CD99L2Q8TCZ2 262 aa16.46■□□□□ 0.23
UPK1A-201ENST00000222275 AK9Q5TCS8 1911 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 BAG3O95817 575 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 SOX10P56693 466 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 PPP4CP60510 307 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 DYNLL1P63167 89 aaKnown RBP16.45■□□□□ 0.22
UPK1A-201ENST00000222275 JAG1P78504 1218 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 TSHZ3Q63HK5 1081 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 KBTBD3Q8NAB2 608 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
UPK1A-201ENST00000222275 MYO5AQ9Y4I1 1855 aaKnown RBP16.44■□□□□ 0.22
UPK1A-201ENST00000222275 LAMB1P07942 1786 aa16.44■□□□□ 0.22
UPK1A-201ENST00000222275 PLCG2P16885 1265 aa16.44■□□□□ 0.22
UPK1A-201ENST00000222275 PDE4AP27815 886 aa16.44■□□□□ 0.22
UPK1A-201ENST00000222275 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
UPK1A-201ENST00000222275 SLC9C2Q5TAH2 1124 aa16.44■□□□□ 0.22
UPK1A-201ENST00000222275 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
UPK1A-201ENST00000222275 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
UPK1A-201ENST00000222275 AATFQ9NY61 560 aaKnown RBP eCLIP16.44■□□□□ 0.22
UPK1A-201ENST00000222275 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
UPK1A-201ENST00000222275 CETPP11597 493 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 PTPRAP18433 802 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 CTGFP29279 349 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 SP3Q02447 781 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 UBE3CQ15386 1083 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
UPK1A-201ENST00000222275 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
UPK1A-201ENST00000222275 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 TEX11Q8IYF3 940 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 FSD1Q9BTV5 496 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 ARHGAP39Q9C0H5 1083 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 OSBPL5Q9H0X9 879 aaPredicted RBP16.43■□□□□ 0.22
UPK1A-201ENST00000222275 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 ZHX2Q9Y6X8 837 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 MAST2Q6P0Q8 1798 aa16.43■□□□□ 0.22
UPK1A-201ENST00000222275 DOCK2Q92608 1830 aa16.42■□□□□ 0.22
UPK1A-201ENST00000222275 KIAA0100Q14667 2235 aaKnown RBP16.42■□□□□ 0.22
UPK1A-201ENST00000222275 CYP7A1P22680 504 aa16.42■□□□□ 0.22
UPK1A-201ENST00000222275 PKN2Q16513 984 aaKnown RBP16.42■□□□□ 0.22
UPK1A-201ENST00000222275 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
UPK1A-201ENST00000222275 FBXO46Q6PJ61 603 aaPredicted RBP16.42■□□□□ 0.22
UPK1A-201ENST00000222275 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
UPK1A-201ENST00000222275 EDC3Q96F86 508 aaKnown RBP16.42■□□□□ 0.22
UPK1A-201ENST00000222275 AFG3L2Q9Y4W6 797 aa16.42■□□□□ 0.22
UPK1A-201ENST00000222275 HIP1O00291 1037 aa16.41■□□□□ 0.22
UPK1A-201ENST00000222275 TBC1D12O60347 775 aa16.41■□□□□ 0.22
UPK1A-201ENST00000222275 PDE6AP16499 860 aa16.41■□□□□ 0.22
UPK1A-201ENST00000222275 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
UPK1A-201ENST00000222275 MAPKAPK5Q8IW41 473 aa16.41■□□□□ 0.22
UPK1A-201ENST00000222275 SCYL3Q8IZE3 742 aa16.41■□□□□ 0.22
UPK1A-201ENST00000222275 TGFBRAP1Q8WUH2 860 aa16.41■□□□□ 0.22
UPK1A-201ENST00000222275 ZFYVE28Q9HCC9 887 aa16.41■□□□□ 0.22
UPK1A-201ENST00000222275 CXCL11O14625 94 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 RNF113AO15541 343 aaKnown RBP16.4■□□□□ 0.22
UPK1A-201ENST00000222275 TLR2O60603 784 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 CTNND1O60716 968 aaKnown RBP16.4■□□□□ 0.22
UPK1A-201ENST00000222275 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
UPK1A-201ENST00000222275 CHGBP05060 677 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 ADD2P35612 726 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 C17orf99Q6UX52 265 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 MIGA1Q8NAN2 632 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 DNAJC18Q9H819 358 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 PTPN22Q9Y2R2 807 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 PDE4DIPQ5VU43 2346 aa16.4■□□□□ 0.22
UPK1A-201ENST00000222275 PDHXO00330 501 aa16.39■□□□□ 0.21
UPK1A-201ENST00000222275 ANKRD23Q86SG2 305 aa16.39■□□□□ 0.21
UPK1A-201ENST00000222275 EFCC1Q9HA90 598 aa16.39■□□□□ 0.21
UPK1A-201ENST00000222275 CPA4Q9UI42 421 aa16.39■□□□□ 0.21
UPK1A-201ENST00000222275 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
UPK1A-201ENST00000222275 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
UPK1A-201ENST00000222275 MYH7P12883 1935 aa16.39■□□□□ 0.21
UPK1A-201ENST00000222275 A0A0G2JLL6 359 aaPredicted RBP16.38■□□□□ 0.21
UPK1A-201ENST00000222275 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
UPK1A-201ENST00000222275 CYP2C8P10632 490 aa16.38■□□□□ 0.21
UPK1A-201ENST00000222275 EVX2Q03828 476 aa16.38■□□□□ 0.21
UPK1A-201ENST00000222275 SLC4A8Q2Y0W8 1093 aa16.38■□□□□ 0.21
UPK1A-201ENST00000222275 PRRT2Q7Z6L0 340 aaPredicted RBP16.38■□□□□ 0.21
UPK1A-201ENST00000222275 METTL16Q86W50 562 aaKnown RBP16.38■□□□□ 0.21
UPK1A-201ENST00000222275 APPBP2Q92624 585 aa16.38■□□□□ 0.21
UPK1A-201ENST00000222275 ERO1AQ96HE7 468 aa16.38■□□□□ 0.21
UPK1A-201ENST00000222275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.38■□□□□ 0.21
UPK1A-201ENST00000222275 SAP30BPQ9UHR5 308 aaKnown RBP16.38■□□□□ 0.21
UPK1A-201ENST00000222275 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
UPK1A-201ENST00000222275 MLLT1Q03111 559 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms