RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 SMCR8Q8TEV9 937 aaPredicted RBP19.45■□□□□ 0.7
NME3-201ENST00000219302 HTATIP2Q9BUP3 242 aa19.45■□□□□ 0.7
NME3-201ENST00000219302 DOCK1Q14185 1865 aa19.45■□□□□ 0.7
NME3-201ENST00000219302 GNAI2P04899 355 aa19.44■□□□□ 0.7
NME3-201ENST00000219302 TRIM27P14373 513 aa19.44■□□□□ 0.7
NME3-201ENST00000219302 MCAMP43121 646 aa19.44■□□□□ 0.7
NME3-201ENST00000219302 PROCA1Q8NCQ7 364 aaPredicted RBP19.44■□□□□ 0.7
NME3-201ENST00000219302 PRO3102Q9H379 93 aa19.44■□□□□ 0.7
NME3-201ENST00000219302 RBM27Q9P2N5 1060 aaKnown RBP19.44■□□□□ 0.7
NME3-201ENST00000219302 COL2A1P02458 1487 aaPredicted RBP19.43■□□□□ 0.7
NME3-201ENST00000219302 IPO8O15397 1037 aaKnown RBP19.43■□□□□ 0.7
NME3-201ENST00000219302 INHAP05111 366 aa19.43■□□□□ 0.7
NME3-201ENST00000219302 CAP2P40123 477 aa19.43■□□□□ 0.7
NME3-201ENST00000219302 G3BP1Q13283 466 aaKnown RBP eCLIP19.43■□□□□ 0.7
NME3-201ENST00000219302 FAM110CQ1W6H9 321 aa19.43■□□□□ 0.7
NME3-201ENST00000219302 GORABQ5T7V8 394 aa19.43■□□□□ 0.7
NME3-201ENST00000219302 ZNF280CQ8ND82 737 aa19.43■□□□□ 0.7
NME3-201ENST00000219302 RAI14Q9P0K7 980 aa19.43■□□□□ 0.7
NME3-201ENST00000219302 SZT2Q5T011 3432 aa19.42■□□□□ 0.7
NME3-201ENST00000219302 BCAR3O75815 825 aa19.42■□□□□ 0.7
NME3-201ENST00000219302 FARP2O94887 1054 aaPredicted RBP19.42■□□□□ 0.7
NME3-201ENST00000219302 CAPN2P17655 700 aa19.42■□□□□ 0.7
NME3-201ENST00000219302 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
NME3-201ENST00000219302 TBC1D2Q9BYX2 928 aa19.42■□□□□ 0.7
NME3-201ENST00000219302 PAK6Q9NQU5 681 aaPredicted RBP19.42■□□□□ 0.7
NME3-201ENST00000219302 PNMA3Q9UL41 463 aa19.42■□□□□ 0.7
NME3-201ENST00000219302 CCER2I3L3R5 266 aa19.41■□□□□ 0.7
NME3-201ENST00000219302 UQCRFS1P1P0C7P4 283 aa19.41■□□□□ 0.7
NME3-201ENST00000219302 SH3D19Q5HYK7 790 aa19.41■□□□□ 0.7
NME3-201ENST00000219302 TEX11Q8IYF3 940 aa19.41■□□□□ 0.7
NME3-201ENST00000219302 SH3RF3Q8TEJ3 882 aaPredicted RBP19.41■□□□□ 0.7
NME3-201ENST00000219302 COA7Q96BR5 231 aa19.41■□□□□ 0.7
NME3-201ENST00000219302 CRISPLD2Q9H0B8 497 aa19.41■□□□□ 0.7
NME3-201ENST00000219302 LRP2BPQ9P2M1 347 aa19.41■□□□□ 0.7
NME3-201ENST00000219302 USP17L5A8MUK1 530 aa19.4■□□□□ 0.7
NME3-201ENST00000219302 ZBTB7BO15156 539 aaPredicted RBP19.4■□□□□ 0.7
NME3-201ENST00000219302 GCLCP48506 637 aaPredicted RBP19.4■□□□□ 0.7
NME3-201ENST00000219302 HMGCS2P54868 508 aa19.4■□□□□ 0.7
NME3-201ENST00000219302 PPP4CP60510 307 aa19.4■□□□□ 0.7
NME3-201ENST00000219302 DEFB118Q96PH6 123 aa19.4■□□□□ 0.7
NME3-201ENST00000219302 GPR108Q9NPR9 543 aa19.4■□□□□ 0.7
NME3-201ENST00000219302 PI4KBQ9UBF8 816 aa19.4■□□□□ 0.7
NME3-201ENST00000219302 HERC5Q9UII4 1024 aaKnown RBP19.4■□□□□ 0.7
NME3-201ENST00000219302 GJD2Q9UKL4 321 aa19.4■□□□□ 0.7
NME3-201ENST00000219302 NR2E3Q9Y5X4 410 aa19.4■□□□□ 0.7
NME3-201ENST00000219302 TFRCP02786 760 aaKnown RBP19.39■□□□□ 0.69
NME3-201ENST00000219302 POLA2Q14181 598 aa19.39■□□□□ 0.69
NME3-201ENST00000219302 CLUAP1Q96AJ1 413 aa19.39■□□□□ 0.69
NME3-201ENST00000219302 WDR18Q9BV38 432 aa19.39■□□□□ 0.69
NME3-201ENST00000219302 ASCC2Q9H1I8 757 aaPredicted RBP19.39■□□□□ 0.69
NME3-201ENST00000219302 JAG1P78504 1218 aa19.38■□□□□ 0.69
NME3-201ENST00000219302 METTL16Q86W50 562 aaKnown RBP19.38■□□□□ 0.69
NME3-201ENST00000219302 FRAT1Q92837 279 aaPredicted RBP19.38■□□□□ 0.69
NME3-201ENST00000219302 DHX36Q9H2U1 1008 aaKnown RBP19.38■□□□□ 0.69
NME3-201ENST00000219302 SNRKQ9NRH2 765 aa19.38■□□□□ 0.69
NME3-201ENST00000219302 PABPC4Q13310 644 aaKnown RBP eCLIP19.37■□□□□ 0.693e-7■■■■□ 23
NME3-201ENST00000219302 TNNI3KQ59H18 835 aa19.37■□□□□ 0.69
NME3-201ENST00000219302 NAA16Q6N069 864 aaPredicted RBP19.37■□□□□ 0.69
NME3-201ENST00000219302 ADGRA1Q86SQ6 560 aa19.37■□□□□ 0.69
NME3-201ENST00000219302 DBNDD2Q9BQY9 259 aa19.37■□□□□ 0.69
NME3-201ENST00000219302 AATFQ9NY61 560 aaKnown RBP eCLIP19.37■□□□□ 0.69
NME3-201ENST00000219302 TAOK2Q9UL54 1235 aa19.37■□□□□ 0.69
NME3-201ENST00000219302 FPGT-TNNI3KV9GXZ4 949 aa19.37■□□□□ 0.69
NME3-201ENST00000219302 BAG3O95817 575 aa19.36■□□□□ 0.69
NME3-201ENST00000219302 CYP2E1P05181 493 aaPredicted RBP19.36■□□□□ 0.69
NME3-201ENST00000219302 ATP8B2P98198 1209 aa19.36■□□□□ 0.69
NME3-201ENST00000219302 FOXP4Q8IVH2 680 aaPredicted RBP19.36■□□□□ 0.69
NME3-201ENST00000219302 TMEM57Q8N5G2 664 aa19.36■□□□□ 0.69
NME3-201ENST00000219302 SSH3Q8TE77 659 aa19.36■□□□□ 0.69
NME3-201ENST00000219302 ZNF512BQ96KM6 892 aaPredicted RBP19.36■□□□□ 0.69
NME3-201ENST00000219302 DNAJC18Q9H819 358 aa19.36■□□□□ 0.69
NME3-201ENST00000219302 AS3MTQ9HBK9 375 aa19.36■□□□□ 0.69
NME3-201ENST00000219302 MORF4L1Q9UBU8 362 aa19.36■□□□□ 0.69
NME3-201ENST00000219302 LOC285556D6RIA3 1793 aa19.36■□□□□ 0.69
NME3-201ENST00000219302 PLCG2P16885 1265 aa19.35■□□□□ 0.69
NME3-201ENST00000219302 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
NME3-201ENST00000219302 BACE1P56817 501 aa19.35■□□□□ 0.69
NME3-201ENST00000219302 CCDC158Q5M9N0 1113 aa19.35■□□□□ 0.69
NME3-201ENST00000219302 TGFBRAP1Q8WUH2 860 aa19.35■□□□□ 0.69
NME3-201ENST00000219302 PAWRQ96IZ0 340 aaKnown RBP19.35■□□□□ 0.69
NME3-201ENST00000219302 NOL10Q9BSC4 688 aaKnown RBP19.35■□□□□ 0.69
NME3-201ENST00000219302 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.35■□□□□ 0.691e-12■■□□□ 11.8
NME3-201ENST00000219302 EVI5O60447 810 aa19.34■□□□□ 0.69
NME3-201ENST00000219302 IGSF3O75054 1194 aa19.34■□□□□ 0.69
NME3-201ENST00000219302 ASNSP08243 561 aa19.34■□□□□ 0.69
NME3-201ENST00000219302 MTMR2Q13614 643 aa19.34■□□□□ 0.69
NME3-201ENST00000219302 TTC39AQ5SRH9 613 aa19.34■□□□□ 0.69
NME3-201ENST00000219302 MAPKAPK5Q8IW41 473 aa19.34■□□□□ 0.69
NME3-201ENST00000219302 P2RX7Q99572 595 aaKnown RBP19.34■□□□□ 0.69
NME3-201ENST00000219302 SIPA1L1O43166 1804 aa19.34■□□□□ 0.69
NME3-201ENST00000219302 ATAD5Q96QE3 1844 aa19.34■□□□□ 0.69
NME3-201ENST00000219302 FLT1P17948 1338 aa19.33■□□□□ 0.69
NME3-201ENST00000219302 C19orf81C9J6K1 198 aa19.33■□□□□ 0.68
NME3-201ENST00000219302 HMGCRP04035 888 aa19.33■□□□□ 0.68
NME3-201ENST00000219302 TRIM32Q13049 653 aa19.33■□□□□ 0.68
NME3-201ENST00000219302 SHROOM1Q2M3G4 852 aaPredicted RBP19.33■□□□□ 0.68
NME3-201ENST00000219302 DIS3LQ8TF46 1054 aaKnown RBP19.33■□□□□ 0.68
NME3-201ENST00000219302 PIH1D3Q9NQM4 214 aaKnown RBP19.33■□□□□ 0.68
NME3-201ENST00000219302 PALD1Q9ULE6 856 aa19.33■□□□□ 0.68
NME3-201ENST00000219302 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms