RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 ILDR1Q86SU0 546 aaPredicted RBP11.38□□□□□ -0.59
CLDN18-201ENST00000183605 TMTC1Q8IUR5 882 aa11.38□□□□□ -0.59
CLDN18-201ENST00000183605 MSANTD4Q8NCY6 345 aa11.38□□□□□ -0.59
CLDN18-201ENST00000183605 PHKBQ93100 1093 aa11.38□□□□□ -0.59
CLDN18-201ENST00000183605 CTAGE1Q96RT6 745 aa11.38□□□□□ -0.59
CLDN18-201ENST00000183605 PAG1Q9NWQ8 432 aa11.38□□□□□ -0.59
CLDN18-201ENST00000183605 GOLGA6L7A0A1B0GV03 622 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 FRMD3A2A2Y4 597 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 ZNF213O14771 459 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 KIF23Q02241 960 aaPredicted RBP11.37□□□□□ -0.59
CLDN18-201ENST00000183605 PPFIA1Q13136 1202 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 TICAM2Q86XR7 235 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 KBTBD3Q8NAB2 608 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLDN18-201ENST00000183605 SAR1BQ9Y6B6 198 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 XRN1Q8IZH2 1706 aaKnown RBP11.37□□□□□ -0.59
CLDN18-201ENST00000183605 A0A0U1RQJ8 604 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 COBLO75128 1261 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 RPS6KA5O75582 802 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 GBP2P32456 591 aaPredicted RBP11.37□□□□□ -0.59
CLDN18-201ENST00000183605 ARHGEF25Q86VW2 580 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 NCOA7Q8NI08 942 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 N4BP2L2Q92802 583 aaPredicted RBP11.37□□□□□ -0.59
CLDN18-201ENST00000183605 SLC26A6Q9BXS9 759 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 MAN1B1Q9UKM7 699 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 RAB21Q9UL25 225 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 NRXN3Q9Y4C0 1643 aa11.37□□□□□ -0.59
CLDN18-201ENST00000183605 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 DNA2P51530 1060 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 IRAK1P51617 712 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 NAA25Q14CX7 972 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 KCTD16Q68DU8 428 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 VEZTQ9HBM0 779 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 MED23Q9ULK4 1368 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 KIF28PB7ZC32 967 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 SRGAP2O75044 1071 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 FDPSP14324 419 aaKnown RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 EZRP15311 586 aaKnown RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 BRD2P25440 801 aaKnown RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 USP5P45974 858 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 NEDD9Q14511 834 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 SHC4Q6S5L8 630 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 CYP26C1Q6V0L0 522 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 DONSONQ9NYP3 566 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 CDC42BPGQ6DT37 1551 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 MROH7-TTC4A0A0A0MT08 1334 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 KIF1CO43896 1103 aaKnown RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 HSPD1P10809 573 aaKnown RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 CLNS1AP54105 237 aaKnown RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 TIMM10P62072 90 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 CEP85LQ5SZL2 805 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 USPL1Q5W0Q7 1092 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 GNL3LQ9NVN8 582 aaKnown RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 HDAC6Q9UBN7 1215 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 TUBE1Q9UJT0 475 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 ODF2LQ9ULJ1 636 aa11.36□□□□□ -0.59
CLDN18-201ENST00000183605 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.36□□□□□ -0.59
CLDN18-201ENST00000183605 GOLGA6L10A6NI86 522 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 ATP5J2-PTCD1G3V325 749 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 PTCD1O75127 700 aaKnown RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 ARHGAP25P42331 645 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 FMR1Q06787 632 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 PLEKHO1Q53GL0 409 aaPredicted RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 ODF2Q5BJF6 829 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 KANK3Q6NY19 840 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 METTL16Q86W50 562 aaKnown RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 ENOX1Q8TC92 643 aaKnown RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 COG1Q8WTW3 980 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 EHD4Q9H223 541 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 SYNRGQ9UMZ2 1314 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 MACROD2A1Z1Q3 448 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 GOLGA8AA7E2F4 631 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 MYO1FO00160 1098 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 PIP4K2AP48426 406 aaPredicted RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 PDCLQ13371 301 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 TMEM139Q8IV31 216 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 TRIM22Q8IYM9 498 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 AIDAQ96BJ3 306 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 SLC24A3Q9HC58 644 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 ARHGEF28Q8N1W1 1705 aaKnown RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 IDEP14735 1019 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
CLDN18-201ENST00000183605 CCDC121Q6ZUS5 278 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 SELENOOQ9BVL4 669 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 HPCAL4Q9UM19 191 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
CLDN18-201ENST00000183605 KRT86O43790 486 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 CDC27P30260 824 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
CLDN18-201ENST00000183605 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
CLDN18-201ENST00000183605 STAMQ92783 540 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms