RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
PKP2-201ENST00000070846 ANKRD62A6NC57 917 aa12.89□□□□□ -0.35
PKP2-201ENST00000070846 KLRF2D3W0D1 207 aa12.89□□□□□ -0.35
PKP2-201ENST00000070846 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
PKP2-201ENST00000070846 CYP19A1P11511 503 aaPredicted RBP12.89□□□□□ -0.35
PKP2-201ENST00000070846 SEPT7Q16181 437 aaKnown RBP12.89□□□□□ -0.35
PKP2-201ENST00000070846 TBC1D9BQ66K14 1250 aa12.89□□□□□ -0.35
PKP2-201ENST00000070846 SLFN13Q68D06 897 aa12.89□□□□□ -0.35
PKP2-201ENST00000070846 NCAPH2Q6IBW4 605 aa12.89□□□□□ -0.35
PKP2-201ENST00000070846 NCAPG2Q86XI2 1143 aa12.89□□□□□ -0.35
PKP2-201ENST00000070846 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
PKP2-201ENST00000070846 ARHGEF35A5YM69 484 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 USP17L3A6NCW0 530 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 USP17L4A6NCW7 530 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 CIAO1O76071 339 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
PKP2-201ENST00000070846 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
PKP2-201ENST00000070846 PRPF4BQ13523 1007 aaKnown RBP12.88□□□□□ -0.35
PKP2-201ENST00000070846 UBE3CQ15386 1083 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 USP17L1Q7RTZ2 530 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 SNX21Q969T3 373 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 SLC5A4Q9NY91 659 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 A0A1B0GVL5 298 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 ARID5AQ03989 594 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 PPP2R5BQ15173 497 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 TAF12Q16514 161 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
PKP2-201ENST00000070846 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 TRMT1Q9NXH9 659 aaKnown RBP12.88□□□□□ -0.35
PKP2-201ENST00000070846 KIF1BO60333 1816 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 MYCP01106 439 aaPredicted RBP12.88□□□□□ -0.35
PKP2-201ENST00000070846 SPAG1Q07617 926 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 NLRX1Q86UT6 975 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
PKP2-201ENST00000070846 ADD1P35611 737 aaKnown RBP12.87□□□□□ -0.35
PKP2-201ENST00000070846 NFIXQ14938 502 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 TAF3Q5VWG9 929 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 CCDC17Q96LX7 622 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 KIF5CO60282 957 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 GDF11O95390 407 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 USP17L8P0C7I0 530 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 UBASH3AP57075 661 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 HAUS3Q68CZ6 603 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 KRT40Q6A162 431 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 SMCO2A6NFE2 343 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 PTH1RQ03431 593 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
PKP2-201ENST00000070846 CELF1Q92879 486 aaKnown RBP12.87□□□□□ -0.35
PKP2-201ENST00000070846 BSDC1Q9NW68 430 aaPredicted RBP12.87□□□□□ -0.35
PKP2-201ENST00000070846 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 RIMBP3CA6NJZ7 1639 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 RIMBP3BA6NNM3 1639 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 RIMBP3Q9UFD9 1639 aa12.87□□□□□ -0.35
PKP2-201ENST00000070846 CACNB3P54284 484 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 KLHL40Q2TBA0 621 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
PKP2-201ENST00000070846 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 TAX1BP1Q86VP1 789 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 CCDC65Q8IXS2 484 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 SYNMO15061 1565 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 COL15A1P39059 1388 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 CRB1P82279 1406 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 JAK2O60674 1132 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 CAVIN2O95810 425 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 BIRC3Q13489 604 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 TTC38Q5R3I4 469 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 SNX29Q8TEQ0 813 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
PKP2-201ENST00000070846 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 OVOS2A0A0J9YW53 1432 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 OVOS2Q6IE36 1432 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 PTPRMP28827 1452 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 GSTTP1A0A1W2PQM5 241 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 SMTNP53814 917 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 HSP90AA2PQ14568 343 aaPredicted RBP12.86□□□□□ -0.35
PKP2-201ENST00000070846 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
PKP2-201ENST00000070846 DNAJC25Q9H1X3 360 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.35
PKP2-201ENST00000070846 URI1O94763 535 aaPredicted RBP12.86□□□□□ -0.35
PKP2-201ENST00000070846 IGKV5-2P06315 115 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 SPECC1Q5M775 1068 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 IFT74Q96LB3 600 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 MLXIPQ9HAP2 919 aa12.86□□□□□ -0.35
PKP2-201ENST00000070846 TET3O43151 1660 aa12.85□□□□□ -0.35
PKP2-201ENST00000070846 H7C1W4 665 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms