RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Nup133Q8R0G9 1155 aa18.15■□□□□ 0.5
Ubp1-206ENSMUST00000216558 4931400O07RikQ9D4M5 137 aa18.15■□□□□ 0.5
Ubp1-206ENSMUST00000216558 Aox4Q3TYQ9 1336 aa18.14■□□□□ 0.49
Ubp1-206ENSMUST00000216558 MyrflQ3UN70 904 aa18.14■□□□□ 0.49
Ubp1-206ENSMUST00000216558 GnptabQ69ZN6 1235 aa18.14■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Pip5kl1Q6U7H8 395 aa18.14■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Tekt3Q6X6Z7 490 aa18.14■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Srek1Q8BZX4 494 aaKnown RBP18.14■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Wdr24Q8CFJ9 790 aa18.14■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Znrd1-asQ8R0E5 213 aa18.14■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Arid4aF8VPQ2 1261 aaKnown RBP18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Vmn2r68L7N2B3 851 aa18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 CgnP59242 1191 aa18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Scg2Q03517 617 aa18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Ncbp1Q3UYV9 790 aaKnown RBP18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Cyp2c67Q569X9 491 aa18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 SpidrQ8BGX7 933 aa18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Cdk8Q8R3L8 464 aa18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Cd248Q91V98 765 aa18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Stk39Q9Z1W9 556 aa18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 VirmaA2AIV2 1811 aaKnown RBP18.13■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Tbc1d8bA3KGB4 1114 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Ces1aE9PYP1 563 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 VrtnQ3SYK4 740 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Tbc1d2bQ3U0J8 965 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 CrkQ64010 304 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Zscan22Q8BGS5 496 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Trmt2aQ8BNV1 574 aaKnown RBP18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Naa30Q8CES0 364 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Lrrc2Q8VDB8 371 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Ndufa8Q9DCJ5 172 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Peak1Q69Z38 1735 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Tgfb2P27090 414 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Lamc2Q61092 1191 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 TrhQ62361 256 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Glis3Q6XP49 780 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Evc2Q8K1G2 1220 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Znf287Q9EQB9 759 aa18.12■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Zfp646Q6NV66 1788 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Lnx1O70263 728 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Il7P10168 154 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 U2af2P26369 475 aaKnown RBP18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Ptpn12P35831 775 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Fdx1P46656 188 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Usp28Q5I043 1051 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Gimap7Q8R379 293 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Prpf3Q922U1 683 aaKnown RBP18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Cep89Q9CZX2 791 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Clip2Q9Z0H8 1047 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Zmym2Q9CU65 1376 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Flt1P35969 1333 aa18.11■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Golgb1E9PVZ8 3238 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Col5a2Q3U962 1497 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Ccdc112A0AUP1 442 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Syce3B5KM66 88 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Dnm1P39053 867 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Eef2P58252 858 aaKnown RBP18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Npr3P70180 536 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Klhdc9Q3USL1 350 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Slc10a5Q5PT54 434 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Acnat2Q8BGG9 420 aa18.1■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Zscan20B2KFW1 1030 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Ythdc1E9Q5K9 736 aaKnown RBP18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Usp53P15975 1069 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Eya3P97480 510 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Spata18Q0P557 537 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Gm28047Q3US59 414 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Map3k12Q60700 888 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Samm50Q8BGH2 469 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Prkag3Q8BGM7 489 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Col4a3bpQ9EQG9 624 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 A0A1W2P6Q8 802 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Gm9048A0A1W2P7H4 802 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 A0A1W2P7Z8 802 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Gm9046A0A1W2P855 802 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Myl3P09542 204 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 OplahQ8K010 1288 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 SrrtQ99MR6 875 aaKnown RBP18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Mad2l2Q9D752 211 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Zbtb22Q9Z0G7 638 aa18.09■□□□□ 0.49
Ubp1-206ENSMUST00000216558 Zscan18E9PUD6 809 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 1700113H08RikE9Q9Q5 327 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Stx8O88983 236 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Kif3aP28741 701 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Vcam1P29533 739 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Tmem109Q3UBX0 243 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Rc3h1Q4VGL6 1130 aaKnown RBP18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 PrimpolQ6P1E7 537 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Usp50Q6P8X6 390 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 CerkQ8K4Q7 531 aa18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Telo2Q9DC40 840 aaKnown RBP18.08■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Cyp3a25O09158 503 aa18.07■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Cplx1P63040 134 aa18.07■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Slc27a1Q60714 646 aa18.07■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Rbm28Q8CGC6 750 aaKnown RBP18.07■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Q8K2W9 541 aa18.07■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Ubac1Q8VDI7 409 aa18.07■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Yeats4Q9CR11 227 aaKnown RBP18.07■□□□□ 0.48
Ubp1-206ENSMUST00000216558 RabggtaQ9JHK4 567 aa18.07■□□□□ 0.48
Ubp1-206ENSMUST00000216558 Tob2Q9JM55 345 aa18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 137.3 ms