RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Mroh6V9GX81 722 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Rgs12Q8CGE9 1381 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Mms22lB1AUR6 1238 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Pus7B7ZNL8 666 aaKnown RBP9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Magea4F2Z493 315 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Eif5P59325 429 aaKnown RBP9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Gsdma2Q32M21 443 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Ube2oQ6ZPJ3 1288 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Asap2Q7SIG6 958 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Wbp1lQ8BGW2 348 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Smoc2Q8CD91 447 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Trim32Q8CH72 655 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Dlk2Q8K1E3 382 aa9.91□□□□□ -0.82
Trim40-203ENSMUST00000172711 Disp2Q8CIP5 1345 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Pet2A2AHY8 747 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Skor2A7M7C7 1008 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Triml2E9PW10 424 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Dhx16G3X8X0 1044 aaKnown RBP9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Slc27a3O88561 667 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Gja8P28236 440 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Vcam1P29533 739 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Igfbp4P47879 254 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Col19a1Q0VF58 1136 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Cfap69Q8BH53 942 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Slc45a1Q8BIV7 751 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Trmt2aQ8BNV1 574 aaKnown RBP9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Snx17Q8BVL3 470 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 PaoxQ8C0L6 504 aa9.9□□□□□ -0.82
Trim40-203ENSMUST00000172711 Trim5E9PV98 497 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 LtkP08923 888 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Hoxd10P28359 340 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Fgd1P52734 960 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Eef2P58252 858 aaKnown RBP9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Pla2g4fQ50L41 855 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Zbtb45Q52KG4 520 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Crhr2Q60748 411 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 DbnlQ62418 436 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Fndc3bQ6NWW9 1207 aaKnown RBP9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Erc2Q6PH08 957 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Slc9c1Q6UJY2 1175 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 U2af1l4Q8BGJ9 220 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Stn1Q8K2X3 378 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ppp1r42Q8R1Z4 357 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Prkag2Q91WG5 566 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Znhit2Q9QY66 399 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 SktA2AQ25 1946 aaKnown RBP9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Col20a1Q923P0 1320 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Col6a3E9PWQ3 3284 aa9.89□□□□□ -0.83
Trim40-203ENSMUST00000172711 Krt24A1L317 512 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 March10E9PX79 788 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 E9Q0B3 247 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Lamp1P11438 406 aaKnown RBP9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Tnni2P13412 182 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Prl3d1P18121 224 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Btbd1P58544 488 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Dynll1P63168 89 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Atp8b2P98199 1209 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Fam83hQ148V8 1209 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Slc16a10Q3U9N9 512 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 D630036H23RikQ3UQD6 204 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Prr7Q3V0I2 269 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Dync1li2Q6PDL0 492 aaKnown RBP9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Abtb2Q7TQI7 1024 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Srgap3Q812A2 1099 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Zswim3Q8CFL8 695 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Myl6bQ8CI43 207 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Med23Q80YQ2 1367 aa9.88□□□□□ -0.83
Trim40-203ENSMUST00000172711 Prss40A6H6T1 365 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Speer2E9Q9U2 264 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Btg4O70552 250 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 MycP01108 439 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Prl7d1P04769 244 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Mum1l1Q4VA55 681 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Krt40Q6IFX3 439 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ltv1Q6NSQ7 470 aaKnown RBP9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ube2q1Q7TSS2 422 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Spata7Q80VP2 582 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Pramel6Q810Y9 485 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Bri3bpQ8BXV2 253 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Inpp5bQ8K337 993 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 CarsQ9ER72 831 aaKnown RBP9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ngly1Q9JI78 651 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Abcc4E9Q236 1325 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ltbp2O08999 1813 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ppp4cP97470 307 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ncf1Q09014 390 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Ptpn18Q61152 453 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Sv2cQ69ZS6 727 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Acap3Q6NXL5 833 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Gpbp1l1Q6NZP2 473 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Tbc1d23Q8K0F1 684 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Xrcc4Q924T3 326 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 MvpQ9EQK5 861 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Capn10Q9ESK3 666 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Sall2Q9QX96 1004 aa9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 PhipQ8VDD9 1821 aaKnown RBP9.87□□□□□ -0.83
Trim40-203ENSMUST00000172711 Frmpd4A2AFR3 1320 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 Gm9857F7CXR1 130 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 B020004C17RikJ3QP07 232 aa9.86□□□□□ -0.83
Trim40-203ENSMUST00000172711 SqleP52019 572 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms