RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Insm1Q63ZV0 521 aa29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Yeats4Q9CR11 227 aaKnown RBP29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Eif4enif1Q9EST3 983 aaKnown RBP29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Btaf1E9QAE3 1848 aa29.84■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Tbc1d30Q69ZT9 766 aa29.84■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Telo2Q9DC40 840 aaKnown RBP29.84■■■□□ 2.37
Tpm1-216ENSMUST00000113707 U2af2P26369 475 aaKnown RBP29.83■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Tekt3Q6X6Z7 490 aa29.83■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Clic4Q9QYB1 253 aa29.83■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Tmem109Q3UBX0 243 aa29.82■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Tsc2Q61037 1814 aa29.82■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Prkag3Q8BGM7 489 aa29.82■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Stk38Q91VJ4 465 aa29.82■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Ripk4Q9ERK0 786 aa29.82■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Ccdc85cE9Q6B2 420 aa29.82■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Mcm3P25206 812 aaKnown RBP29.82■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Cdca8Q8BHX3 289 aa29.82■■■□□ 2.36
Tpm1-216ENSMUST00000113707 IarsQ8BU30 1262 aa29.82■■■□□ 2.36
Tpm1-216ENSMUST00000113707 CerkQ8K4Q7 531 aa29.82■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Zfp51Q3U4L8 781 aa29.81■■■□□ 2.36
Tpm1-216ENSMUST00000113707 LrmpQ60664 539 aa29.81■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Ezh2Q61188 746 aaKnown RBP29.81■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Vps37dQ810I0 261 aa29.81■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Skor1Q8BX46 964 aa29.81■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Fam186bD3Z420 943 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Zbtb21E9Q444 1094 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Myl3P09542 204 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Tm4sf1Q64302 202 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 DaglaQ6WQJ1 1044 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Prpf3Q922U1 683 aaKnown RBP29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Xrcc4Q924T3 326 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 VrtnQ3SYK4 740 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Pdzph1Q8BGR1 1238 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Gpatch3Q8BIY1 525 aa29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Rbm28Q8CGC6 750 aaKnown RBP29.8■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Scg2Q03517 617 aa29.79■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Gimap7Q8R379 293 aa29.79■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Ttc5Q99LG4 440 aa29.79■■■□□ 2.36
Tpm1-216ENSMUST00000113707 TnmdQ9EP64 317 aa29.79■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Ifi207E9Q3L4 978 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Sptlc2P97363 560 aaKnown RBP29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Sec62Q8BU14 398 aaKnown RBP29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Cdk8Q8R3L8 464 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Ubac1Q8VDI7 409 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Clip2Q9Z0H8 1047 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Cfap70D3YVL2 1141 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Fam184aE9PW83 1143 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Pip5kl1Q6U7H8 395 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Mxd3Q80US8 206 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Rnf214Q8BFU3 668 aaKnown RBP29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Plekhg6Q8R0J1 787 aa29.78■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Ltbp2O08999 1813 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Stx8O88983 236 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Usp53P15975 1069 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Ptpn12P35831 775 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Epha2Q03145 977 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Fam178bQ24JP3 464 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Ncbp1Q3UYV9 790 aaKnown RBP29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Kcnj14Q8JZN3 434 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Pik3ap1Q9EQ32 811 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Sh3bgrQ9WUZ7 214 aa29.77■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Slc27a1Q60714 646 aa29.76■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Rgs17Q9QZB0 210 aa29.76■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Tulp1Q9Z273 543 aa29.76■■■□□ 2.36
Tpm1-216ENSMUST00000113707 Peak1Q69Z38 1735 aa29.76■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Itgb4A2A863 1818 aa29.76■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Vmn2r68L7N2B3 851 aa29.76■■■□□ 2.35
Tpm1-216ENSMUST00000113707 EgfrQ01279 1210 aa29.76■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Usp50Q6P8X6 390 aa29.76■■■□□ 2.35
Tpm1-216ENSMUST00000113707 CrebrfQ8CDG5 640 aaKnown RBP29.76■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Ciapin1Q8WTY4 309 aa29.76■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Frmpd3A0A140LIW3 1774 aa29.75■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Ces1aE9PYP1 563 aa29.75■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Q8K2W9 541 aa29.75■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Znf287Q9EQB9 759 aa29.75■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Aox4Q3TYQ9 1336 aa29.75■■■□□ 2.35
Tpm1-216ENSMUST00000113707 A0A1Y7VML8 143 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Cyp3a25O09158 503 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Il7P10168 154 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Tbc1d2bQ3U0J8 965 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 GnptabQ69ZN6 1235 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Ddx31Q6NZQ2 687 aaKnown RBP29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Atp1a3Q6PIC6 1013 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Zmym2Q9CU65 1376 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Csf1rP09581 977 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 AaasP58742 546 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Eya3P97480 510 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 1700013D24RikQ0P521 120 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Triml1Q8BVP1 470 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Txnrd3Q99MD6 652 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Zbed3Q9D0L1 228 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Clstn1Q9EPL2 979 aa29.74■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Mctp1E9PV86 951 aa29.73■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Olfr247E9PVJ7 320 aa29.73■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Olfr819K7N727 320 aa29.73■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Ampd3O08739 766 aa29.73■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Tob2Q9JM55 345 aa29.73■■■□□ 2.35
Tpm1-216ENSMUST00000113707 NenfQ9CQ45 171 aa29.72■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Mad2l2Q9D752 211 aa29.72■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Pramel3A2AHA7 463 aa29.72■■■□□ 2.35
Retrieved 100 of 22,080 RNA–protein pairs in 148.1 ms