RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Sp8Q8BMJ8 486 aa14.61□□□□□ -0.07
Trim50-202ENSMUST00000111180 Rtp1Q8C8C1 263 aa14.61□□□□□ -0.07
Trim50-202ENSMUST00000111180 Zbtb43Q9DAI4 467 aa14.61□□□□□ -0.07
Trim50-202ENSMUST00000111180 Tmod2Q9JKK7 351 aa14.61□□□□□ -0.07
Trim50-202ENSMUST00000111180 Catsper2A2ARP9 588 aa14.6□□□□□ -0.07
Trim50-202ENSMUST00000111180 CnpP16330 420 aa14.6□□□□□ -0.07
Trim50-202ENSMUST00000111180 Pald1P70261 859 aa14.6□□□□□ -0.07
Trim50-202ENSMUST00000111180 PcQ05920 1178 aa14.6□□□□□ -0.07
Trim50-202ENSMUST00000111180 Ddx49Q4FZF3 480 aaKnown RBP14.6□□□□□ -0.07
Trim50-202ENSMUST00000111180 Rufy3Q9D394 469 aa14.6□□□□□ -0.07
Trim50-202ENSMUST00000111180 Lama2Q60675 3118 aaKnown RBP14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Lbhd1A0A087WPA0 259 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Clrn2B2RVW2 232 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Cyp3a59D3Z2W7 503 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Cd3dP04235 173 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Klrg2Q3UM83 387 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Lgr6Q3UVD5 967 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Krt74Q6IFZ9 495 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Htatsf1Q8BGC0 757 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Shisa4Q8CA71 197 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Tbc1d23Q8K0F1 684 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Fam83aQ8K2P2 436 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 RragcQ99K70 398 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 MsraQ9D6Y7 233 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 1700018B08RikQ9DA83 213 aa14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Pes1Q9EQ61 584 aaKnown RBP14.59□□□□□ -0.07
Trim50-202ENSMUST00000111180 Gm29094F6Q785 221 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Pkp1P97350 728 aaKnown RBP14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Spryd7Q3TFQ1 196 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ccdc174Q3U155 467 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Rsph3aQ3UFY4 516 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ccdc148Q6P5U8 527 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ankrd13aQ80UP5 588 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Cep55Q8BT07 462 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Fsd2Q8BZ52 692 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Pof1bQ8K4L4 587 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Kcnc4Q8R1C0 628 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Tut1Q8R3F9 869 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Eaf2Q91ZD6 262 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Dock5B2RY04 1868 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 NesQ6P5H2 1864 aaKnown RBP14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Myh2G3UW82 1942 aa14.58□□□□□ -0.08
Trim50-202ENSMUST00000111180 Acsl1P41216 699 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ercc3P49135 783 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Exosc10P56960 887 aaKnown RBP14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Kif20aP97329 887 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Q3TYL0 343 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Gxylt1Q3UHH8 404 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Rasa3Q60790 834 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Cep131Q62036 1060 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Acap3Q6NXL5 833 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Slc44a1Q6X893 653 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ppp1r10Q80W00 888 aaKnown RBP14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ttc12Q8BW49 704 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Stn1Q8K2X3 378 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Kcnq3Q8K3F6 873 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Gpr108Q91WD0 569 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Hps4Q99KG7 671 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 BrapQ99MP8 591 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Jag1Q9QXX0 1218 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Tsc2Q61037 1814 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Rgs12Q8CGE9 1381 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Fdx1P46656 188 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Cyp4f37Q3V1F1 546 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Sh2d1b2Q45HK4 132 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Gm11437Q5QR91 290 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Tm4sf1Q64302 202 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 St18Q80TY4 1045 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Zkscan1Q8BGS3 561 aaKnown RBP14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Il31raQ8K5B1 716 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Tceanc2Q8R2M0 207 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Gbp7Q91Z40 638 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Xrcc4Q924T3 326 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ccdc39Q9D5Y1 937 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Zbtb12Q9Z150 459 aa14.57□□□□□ -0.08
Trim50-202ENSMUST00000111180 Plekhg2Q6KAU7 1340 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Tanc1Q0VGY8 1856 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Pde11aP0C1Q2 933 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Tnni2P13412 182 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Cbx2P30658 519 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Syt1P46096 421 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Atoh1P48985 351 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Q3UK37 420 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ncbp1Q3UYV9 790 aaKnown RBP14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ctr9Q62018 1173 aaKnown RBP14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 HelbQ6NVF4 1074 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Ttll4Q80UG8 1193 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Pms1Q8K119 917 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 MlphQ91V27 590 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Borcs6Q9D6W8 360 aa14.56□□□□□ -0.08
Trim50-202ENSMUST00000111180 Elmsan1E9Q2I4 1089 aaKnown RBP14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Bnip3O55003 187 aa14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Grem2O88273 168 aa14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Trmt1Q3TX08 663 aa14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Tbc1d2bQ3U0J8 965 aa14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Lins1Q3U1D0 764 aa14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Spata21Q8BHW6 681 aa14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Myl6bQ8CI43 207 aa14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Paf1Q8K2T8 535 aa14.55□□□□□ -0.08
Trim50-202ENSMUST00000111180 Mrpl50Q8VDT9 159 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms