RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Ddit3P35639 168 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Zfp113Q8C689 439 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 CactinQ9CS00 772 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ier5O89113 308 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Tcp1P11983 556 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Atp11aP98197 1187 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Adam1aQ60813 791 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 MyripQ8K3I4 856 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Naa16Q9DBB4 864 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Krt39Q6IFX4 482 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Fbxo41Q6NS60 873 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Irak4Q8R4K2 459 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ubac1Q8VDI7 409 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Riok1Q922Q2 567 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Riok3Q9DBU3 519 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Zbtb40Q6PCS8 1258 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 MyclP10166 368 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Tcp11Q01755 566 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Mcm7Q61881 719 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Slx4Q6P1D7 1565 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Rab11fip4Q8BQP8 635 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Pacsin2Q9WVE8 486 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Pde3aQ9Z0X4 1141 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Gm28043E0CXC2 719 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 HdgfP51859 237 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Pkp1P97350 728 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 LbrQ3U9G9 626 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Myo6Q64331 1265 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 NexmifQ5DTT1 1515 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Apol7aB2RT54 418 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ccdc70Q9D9B0 223 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 AvenQ9D9K3 342 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Zscan18E9PUD6 809 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Nap1l2P51860 460 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Rbm19Q8R3C6 952 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Dnajc8Q6NZB0 253 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Sgsm2Q80U12 1005 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Sdccag8Q80UF4 717 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Tex14Q7M6U3 1450 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ddx23D3Z0M9 819 aaKnown RBP6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Krt14Q61781 484 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Kank4Q6P9J5 1016 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Atg3Q9CPX6 314 aa6.67□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Krt7Q9DCV7 457 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Rabep2Q91WG2 554 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Haus2Q9CQS9 234 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Echdc1Q9D9V3 322 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Otud7bB2RUR8 840 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Elmsan1E9Q2I4 1089 aaKnown RBP6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 E330017A01RikQ8BU47 192 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Kif9Q9WV04 790 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Xab2Q9DCD2 855 aaKnown RBP6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Snx1Q9WV80 522 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Dact3Q0PHV7 610 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Srek1ip1Q4V9W2 153 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Dennd6aQ8BH65 605 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Cyp2j7A0A140T8U1 504 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ppp1r12bQ8BG95 976 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Atad3Q925I1 591 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 CntrobQ8CB62 887 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 IkQ9Z1M8 557 aaKnown RBP6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Zfp651E9PZ11 729 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 SpertQ32MG2 446 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 NelfbQ8C4Y3 580 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 XpcP51612 930 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Serpinb6Q60854 378 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 1700122O11RikJ3QPW6 241 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Gsta4P24472 222 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Sh3d21Q7TSG5 549 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Fgd4Q91ZT5 766 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Psma8Q9CWH6 250 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 MarcksP26645 309 aaKnown RBP6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ccdc28aQ8CEI3 192 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Krt25Q8VCW2 446 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Psma7Q9Z2U0 248 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Speer4f2E9Q366 295 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ano9P86044 747 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Irf9Q61179 399 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Jph4Q80WT0 628 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Q8BWG4 1187 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Gpcpd1Q8C0L9 675 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Dnajc17Q91WT4 303 aa6.66□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Aox2Q5SGK3 1345 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Gm5862K7N5V5 267 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Cdc37Q61081 379 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Krt74Q6IFZ9 495 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ncaph2Q8BSP2 607 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Akr1b8P45377 316 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Traf3ip1Q149C2 625 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Palb2Q3U0P1 1104 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Slc10a4Q3UEZ8 437 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ccpg1Q640L3 753 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Ccdc92Q8VDN4 314 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Paip2bQ91W45 136 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Palm3A2TJV2 734 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 EngaseQ8BX80 734 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Surf1P09925 306 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Traf1P39428 409 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Usp28Q5I043 1051 aa6.65□□□□□ -1.34
Ubr4-201ENSMUST00000097822 Nlrp4aQ8BU40 982 aa6.65□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms