RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Luzp1Q8R4U7 1068 aaKnown RBP11□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Krt84Q99M73 603 aa11□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 NenfQ9CQ45 171 aa11□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Tktl2Q9D4D4 627 aa11□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Abl1P00520 1123 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 IntuQ059U7 942 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Ap5z1Q3U829 807 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 HelbQ6NVF4 1074 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Lrrc8aQ80WG5 810 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 MbipQ99LQ1 341 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Q9CYI0 393 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Atp8b5A3FIN4 1183 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 SowahdQ8BY98 327 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Nop2Q922K7 793 aaKnown RBP10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Sh3bp5lQ99LH9 392 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Cnpy3Q9DAU1 276 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Plch1Q4KWH5 1682 aa10.99□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Ces1hD3Z298 562 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 MycnP03966 462 aaKnown RBP10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Cd3dP04235 173 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Pde11aP0C1Q2 933 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Cep63Q3UPP8 700 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Rbm15bQ6PHZ5 887 aaKnown RBP10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Vps37dQ810I0 261 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Hps6Q8BLY7 805 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Srek1Q8BZX4 494 aaKnown RBP10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Wdr64Q9D565 1086 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Xpo4Q9ESJ0 1151 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Gja10Q9WUS4 505 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Celf1P28659 486 aaKnown RBP10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Q3TYL0 343 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Usp13Q5BKP2 858 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 TfrcQ62351 763 aaKnown RBP10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Slc44a1Q6X893 653 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Slu7Q8BHJ9 585 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Ttc12Q8BW49 704 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Kiaa1524Q8BWY9 907 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Terb1Q8C0V1 768 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Bap1Q99PU7 728 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Mis12Q9CY25 206 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Grin2dQ03391 1323 aa10.98□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Myh7bA2AQP0 1941 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Gm13023A2A8N2 498 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Dnajc25A2ALW5 357 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Mapkapk5O54992 473 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Map9Q3TRR0 646 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Usp49Q6P9L4 685 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Adck5Q80V03 582 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Srp68Q8BMA6 625 aaKnown RBP10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Olfm5Q8BU90 496 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Pm20d1Q8C165 503 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Pik3ap1Q9EQ32 811 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Stxbp4Q9WV89 557 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Magi2Q9WVQ1 1275 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Cdc27A2A6Q5 825 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Ankrd63A2ARS0 390 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 LtkP08923 888 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Stat5bP42232 786 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Foxp1P58462 705 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Rtel1Q0VGM9 1203 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Znf653Q6YND2 615 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Ctdspl2Q8BG15 465 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Dbndd1Q9CZ00 160 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Stag1Q9D3E6 1258 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Tfcp2Q9ERA0 502 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Irs4Q9Z0Y7 1216 aa10.97□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Dennd3A2RT67 1274 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Trim55G3X8Y1 545 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Wnt7aP24383 349 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Fam83bQ0VBM2 1012 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Arhgef16Q3U5C8 713 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Arid3aQ62431 601 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Tpm4Q6IRU2 248 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Frmd3Q8BHD4 595 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Rtn1Q8K0T0 780 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Gpr108Q91WD0 569 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 WtapQ9ER69 396 aa10.96□□□□□ -0.65
Cpsf3-201ENSMUST00000067284 Lcmt1A0A0U1RNF2 332 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Pet2A2AHY8 747 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Ankrd35E9Q9D8 996 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Nmt2O70311 529 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Slurp2P0DP59 97 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Rhbdl3P58873 404 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Irx1P81068 480 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Atp1b3P97370 278 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Smarcc1P97496 1104 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Fam89aQ14BJ1 175 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Cdkl5Q3UTQ8 938 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Ckap2Q3V1H1 664 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Prpf4bQ61136 1007 aaKnown RBP10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 MlphQ91V27 590 aa10.96□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Dnai2A2AC93 623 aa10.95□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Pde4bB1AWC9 736 aa10.95□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Ube4aE9Q735 1028 aa10.95□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Myo1bP46735 1107 aa10.95□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Cplx2P84086 134 aa10.95□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Rtkn2Q14B46 604 aa10.95□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Sf3b2Q3UJB0 878 aaKnown RBP10.95□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Cct8l1Q80YT3 562 aa10.95□□□□□ -0.66
Cpsf3-201ENSMUST00000067284 Rec8Q8C5S7 591 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms