RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Apba2P98084 750 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Nell2Q61220 819 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Msl1Q6PDM1 616 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Pdcl2Q78Y63 240 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Rnf214Q8BFU3 668 aaKnown RBP13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Acnat2Q8BGG9 420 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Prkag3Q8BGM7 489 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 E4f1Q8CCE9 783 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Prpf3Q922U1 683 aaKnown RBP13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Chd1lQ9CXF7 900 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Cep89Q9CZX2 791 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Nfe2l3Q9WTM4 660 aa13.08□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Gm43638A0A0J9YU36 694 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Mctp1E9PV86 951 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Clec11aO88200 328 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Tyro3P55144 880 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Usp25P57080 1055 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Znf667Q2TL60 609 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Nom1Q3UFM5 854 aaKnown RBP13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 LrmpQ60664 539 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Atp2b4Q6Q477 1205 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Fez1Q8K0X8 392 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Lrrc2Q8VDB8 371 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Slc44a4Q91VA1 707 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Clic4Q9QYB1 253 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Zfp831A2ADM8 1628 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Peak1Q69Z38 1735 aa13.07□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Epb41l2O70318 988 aaKnown RBP13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Epha2Q03145 977 aa13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Scg2Q03517 617 aa13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Prpf38aQ4FK66 312 aaKnown RBP13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Pip5kl1Q6U7H8 395 aa13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 DlatQ8BMF4 642 aa13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Olfml1Q8BSH2 233 aa13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 HibadhQ99L13 335 aaKnown RBP13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Snw1Q9CSN1 536 aaKnown RBP13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 TicrrQ8BQ33 1889 aa13.06□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Zscan25B2RX31 543 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Usp17lbE9Q9U0 468 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Cyp3a25O09158 503 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Gja5Q01231 358 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Dok7Q18PE0 504 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Slc27a1Q60714 646 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Snx13Q6PHS6 957 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Hook1Q8BIL5 728 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Col23a1Q8K4G2 532 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Gtf3c5Q8R2T8 520 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 NenfQ9CQ45 171 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Znf287Q9EQB9 759 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Frmpd3A0A140LIW3 1774 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Fam186bD3Z420 943 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Zkscan7E9PVW1 718 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Kif23E9Q5G3 953 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 DnttP09838 530 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Ftl1P29391 183 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 XpcP51612 930 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 EgfrQ01279 1210 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Atp1a3Q6PIC6 1013 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Myl6bQ8CI43 207 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 ParnQ8VDG3 624 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Hps4Q99KG7 671 aa13.05□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Ccdc88aQ5SNZ0 1873 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Cfap157Q0VFX2 523 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Ncbp1Q3UYV9 790 aaKnown RBP13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Tekt3Q6X6Z7 490 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Glis3Q6XP49 780 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Tango6Q8C3S2 1079 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 CrebrfQ8CDG5 640 aaKnown RBP13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Rbm28Q8CGC6 750 aaKnown RBP13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Gimap7Q8R379 293 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Tspyl4Q8VD63 406 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Pcdhb5Q91XZ5 792 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Ndufv1Q91YT0 464 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Nop2Q922K7 793 aaKnown RBP13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Trim11Q99PQ2 467 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Mei1Q9D4I2 1268 aa13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Rai14Q9EP71 979 aaKnown RBP13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Gtf2iQ9ESZ8 998 aaKnown RBP13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Utp3Q9JI13 469 aaKnown RBP13.04□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Pramel3A2AHA7 463 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Gm7903A2AWL1 463 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 AV320801A2AWL3 467 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Gm15023L7MUB4 467 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 GnaqP21279 359 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Atp6v1aP50516 617 aaKnown RBP13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Tcp11l1Q8BTG3 509 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Sec62Q8BU14 398 aaKnown RBP13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Smc2Q8CG48 1191 aaKnown RBP13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Nup133Q8R0G9 1155 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Tob2Q9JM55 345 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Aox4Q3TYQ9 1336 aa13.03□□□□□ -0.32
Vamp1-202ENSMUST00000063588 Cspp1B2RX88 1205 aa13.02□□□□□ -0.33
Vamp1-202ENSMUST00000063588 Stx1aO35526 288 aa13.02□□□□□ -0.33
Vamp1-202ENSMUST00000063588 Grem2O88273 168 aa13.02□□□□□ -0.33
Vamp1-202ENSMUST00000063588 Terf1P70371 421 aa13.02□□□□□ -0.33
Vamp1-202ENSMUST00000063588 Znf18Q810A1 556 aa13.02□□□□□ -0.33
Vamp1-202ENSMUST00000063588 Kcnj14Q8JZN3 434 aa13.02□□□□□ -0.33
Vamp1-202ENSMUST00000063588 Ubac1Q8VDI7 409 aa13.02□□□□□ -0.33
Vamp1-202ENSMUST00000063588 Xrcc4Q924T3 326 aa13.02□□□□□ -0.33
Vamp1-202ENSMUST00000063588 Dynll2Q9D0M5 89 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms