RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Olfr119Q7TRJ5 321 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ttc12Q8BW49 704 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Zmynd15Q8C0R7 736 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Zswim4Q8C7B8 1101 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Wasf1Q8R5H6 559 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Washc1Q8VDD8 475 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Krt23Q99PS0 422 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 AatfQ9JKX4 526 aaKnown RBP11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Zranb2Q9R020 330 aaKnown RBP11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Gm3409A0A0G2JE67 319 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ccdc191J3QQ27 883 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Wnt7aP24383 349 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 LtbrP50284 415 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Slc27a1Q60714 646 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Slc44a1Q6X893 653 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Pde5aQ8CG03 865 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Taf6lQ8R2K4 616 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tspyl4Q8VD63 406 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ubac1Q8VDI7 409 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Atp1a4Q9WV27 1032 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Pard3Q99NH2 1333 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Zscan20B2KFW1 1030 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Rsph10bE9PYQ0 876 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ttll12Q3UDE2 639 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Plekho1Q9JIY0 408 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Vstm4T1NXB5 319 aa11.17□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Calcoco2A2A6M5 331 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tbc1d8bA3KGB4 1114 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Adssl1P28650 457 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 TbcaP48428 108 aaKnown RBP11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ric8aQ3TIR3 530 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Il17raQ60943 864 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Fez2Q6TYB5 348 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ube3cQ80U95 1083 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Enox1Q8BHR2 643 aaKnown RBP11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Terb1Q8C0V1 768 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tubb4aQ9D6F9 444 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Hdac6Q9Z2V5 1149 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Myh7bA2AQP0 1941 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Lama4P97927 1816 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Acad12D3Z7X0 555 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Speer4dL7N216 212 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Dctn1O08788 1281 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Epb41l2O70318 988 aaKnown RBP11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Myl3P09542 204 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 PparaP23204 468 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Plekhf1Q3TB82 279 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Plbd2Q3TCN2 594 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cnnm2Q3TWN3 875 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ckap2Q3V1H1 664 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Slc38a10Q5I012 1090 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ift88Q61371 824 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Smc2Q8CG48 1191 aaKnown RBP11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Gpr108Q91WD0 569 aa11.16□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 A0A1L1SQF0 893 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Dennd3A2RT67 1274 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cep85Q8BMK0 761 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Lrrd1Q8C0R9 853 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 MicalclQ9D5U9 680 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Foxo4Q9WVH3 505 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 A0A1Y7VML8 143 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Myo1aO88329 1043 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Cd3dP04235 173 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Pde11aP0C1Q2 933 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Epc1Q8C9X6 813 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Thap2Q9D305 217 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 PdclQ9DBX2 301 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Gm4340L7N2C4 268 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Sox5P35710 763 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 ItpripQ3TNL8 555 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Igsf3Q6ZQA6 1194 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Tbc1d5Q80XQ2 815 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Caps2Q8BUG5 550 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Nat10Q8K224 1024 aaKnown RBP11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Nod2Q8K3Z0 1020 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Pcdhgc5Q91XW9 944 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Ndufb9Q9CQJ8 179 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 FliiQ9JJ28 1271 aa11.15□□□□□ -0.62
Ccdc40-202ENSMUST00000053440 Casp1P29452 402 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Nab2Q61127 525 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cyp24a1Q64441 514 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Tcp11l2Q8K1H7 517 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rbm19Q8R3C6 952 aaKnown RBP11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Tmem143Q8VD26 458 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Apobec3Q99J72 440 aaKnown RBP11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Hip1rQ9JKY5 1068 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Eif2ak3Q9Z2B5 1114 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cdhr2E9Q7P9 1308 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gjb4Q02738 266 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Mrps31Q61733 384 aaKnown RBP11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 HelbQ6NVF4 1074 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 VmacQ8BP01 174 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rapgef3Q8VCC8 918 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Bcl11bQ99PV8 884 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Smc1aQ9CU62 1233 aaKnown RBP11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ssc5dQ8BV57 1371 aa11.14□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 A0A1W2P6Q8 802 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gm9048A0A1W2P7H4 802 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 A0A1W2P7S8 802 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 A0A1W2P7Z8 802 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms