RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Spata16Q8C636 571 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc186Q8C9S4 917 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tubgcp2Q921G8 905 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Klhl40Q9D783 621 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Stard3nlQ9DCI3 235 aa9.36□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Arhgef16Q3U5C8 713 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Map3k11Q80XI6 850 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Enox1Q8BHR2 643 aaKnown RBP9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ankk1Q8BZ25 745 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 CrebzfQ91ZR3 358 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Brms1Q99N20 246 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc47Q9D024 483 aaKnown RBP9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc83Q9D4V3 305 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc39Q9D5Y1 937 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cbx6Q9DBY5 414 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Sik3Q6P4S6 1311 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cdc27A2A6Q5 825 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tpm3-rs7D3Z2H9 248 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Pde11aP0C1Q2 933 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Pla2g4bP0C871 782 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tubb4bP68372 445 aaKnown RBP9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 ItpripQ3TNL8 555 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Atp1a2Q6PIE5 1020 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Haus7Q8BKT8 364 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ppil4Q9CXG3 492 aaKnown RBP9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 TnksQ6PFX9 1320 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Gcom1E9PZ54 550 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Prl3d2F6R3P9 224 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Nf2P46662 596 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Klra9Q2TJJ8 266 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 MyzapQ3UIJ9 466 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tax1bp1Q3UKC1 814 aaKnown RBP9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Esyt3Q5DTI8 891 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ovgp1Q62010 721 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 B4galnt4Q766D5 1034 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tubb2aQ7TMM9 445 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cdc23Q8BGZ4 597 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Dnajc5gQ8C632 165 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ppfibp1Q8C8U0 969 aaKnown RBP9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Phldb2Q8K1N2 1249 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Pcdhb22Q91XZ8 794 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Slc5a4bQ91ZP4 660 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Tubb2bQ9CWF2 445 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Calr3Q9D9Q6 380 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 PdclQ9DBX2 301 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 PigbQ9JJQ0 542 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Klra10Q9R1G6 266 aa9.35□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Zfp651E9PZ11 729 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cyp26a1O55127 497 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Atp8b1Q148W0 1251 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Elf1Q60775 612 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Shisa4Q8CA71 197 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cnot6lQ8VEG6 555 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Hip1rQ9JKY5 1068 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ampd3O08739 766 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ankrd40Q5SUE8 363 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Fhod1Q6P9Q4 1197 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Rps6kc1Q8BLK9 1056 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Ccdc73Q8CDM4 1066 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 MrgbpQ9DAT2 204 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Appbp2Q9DAX9 585 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Vstm4T1NXB5 319 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 CpdO89001 1377 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 AtrnQ9WU60 1428 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Atp8b5A3FIN4 1183 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Lmnb1P14733 588 aaKnown RBP9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 SsbP32067 415 aaKnown RBP9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Pola2P33611 600 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cdr2P97817 455 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Sycp1Q62209 993 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Adcy2Q80TL1 1090 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Zc3h6Q8BYK8 1177 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Hgh1Q8C3I8 393 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 DymQ8CHY3 669 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 BaatQ91X34 420 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Mrps25Q9D125 171 aaKnown RBP9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Armc9Q9D2I5 817 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Cwc25Q9DBF7 416 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Slc5a4aQ9ET37 656 aa9.34□□□□□ -0.91
Cdc40-201ENSMUST00000044166 Col15a1O35206 1367 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Lama4P97927 1816 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cyp3a57D3YYZ0 503 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ugt1a6bK9J7B2 531 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Slc4a1P04919 929 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Sdc2P43407 202 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rad23aP54726 363 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ccdc33Q3ULW6 985 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ugt1a6Q64435 531 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ugt1a7cQ6ZQM8 531 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Nek5Q7TSC3 627 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Naa25Q8BWZ3 972 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Bola3Q8CEI1 110 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Lrrc2Q8VDB8 371 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Card14Q99KF0 999 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 SelenooQ9DBC0 667 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Syde2E9PUP1 1314 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Adssl1P28650 457 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Usp5P56399 858 aaKnown RBP9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cep112Q5PR68 954 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Prl2c1Q5SVL9 228 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms