RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Aox4Q3TYQ9 1336 aa26.68■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Dock5B2RY04 1868 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Me1P06801 572 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 PtmaP26350 111 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Sept14Q9DA97 430 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Ces1aE9PYP1 563 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Ftl1P29391 183 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Mtx1P47802 317 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Npr3P70180 536 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Smarcc2Q6PDG5 1213 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Pus7lQ8CE46 702 aa26.67■■□□□ 1.86
Upf3a-201ENSMUST00000043767 UncxO08934 530 aa26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Ptpn12P35831 775 aa26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Bola3Q8CEI1 110 aa26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Ltbp2O08999 1813 aa26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Naaladl2A0A0N4SUJ3 795 aa26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Metap2O08663 478 aaKnown RBP26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Limch1Q3UH68 1057 aa26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Cep57l1Q8VDS7 400 aa26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Yipf1Q91VU1 306 aa26.66■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Prr16A3KMN5 304 aa26.65■■□□□ 1.86
Upf3a-201ENSMUST00000043767 KhnynQ80U38 671 aa26.65■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Cdk8Q8R3L8 464 aa26.65■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Cnpy3Q9DAU1 276 aa26.65■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Aox1O54754 1333 aa26.65■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Gm9992B2RWK3 458 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Rgs9O54828 675 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 FosbP13346 338 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Map3k9Q3U1V8 1077 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Rc3h1Q4VGL6 1130 aaKnown RBP26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Cep131Q62036 1060 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 GnptabQ69ZN6 1235 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Unc93aQ710D3 458 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Gjd4Q8BSD4 364 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Tmem79Q9D709 391 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Lamb1P02469 1786 aa26.64■■□□□ 1.86
Upf3a-201ENSMUST00000043767 Myl3P09542 204 aa26.64■■□□□ 1.85
Upf3a-201ENSMUST00000043767 TbcaP48428 108 aaKnown RBP26.64■■□□□ 1.85
Upf3a-201ENSMUST00000043767 FktnQ8R507 461 aa26.64■■□□□ 1.85
Upf3a-201ENSMUST00000043767 ZwintQ9CQU5 252 aa26.64■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Rnaseh2aQ9CWY8 301 aa26.64■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Clstn1Q9EPL2 979 aa26.64■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Fam186bD3Z420 943 aa26.63■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Vcam1P29533 739 aa26.63■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Usp50Q6P8X6 390 aa26.63■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Flvcr1B2RXV4 560 aa26.62■■□□□ 1.85
Upf3a-201ENSMUST00000043767 D1Pas1P16381 660 aa26.62■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Lamc2Q61092 1191 aa26.62■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Tekt3Q6X6Z7 490 aa26.62■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Rgs12Q8CGE9 1381 aa26.62■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Llgl2Q3TJ91 1027 aa26.62■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Ccdc47Q9D024 483 aaKnown RBP26.62■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Atxn7Q8R4I1 867 aa26.61■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Klrc1Q9Z202 244 aa26.61■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Zmym2Q9CU65 1376 aa26.61■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Ces1hD3Z298 562 aa26.61■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Vmn2r68L7N2B3 851 aa26.61■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Stac3Q8BZ71 360 aa26.61■■□□□ 1.85
Upf3a-201ENSMUST00000043767 CerkQ8K4Q7 531 aa26.61■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Gm20425E9Q035 978 aaKnown RBP26.6■■□□□ 1.85
Upf3a-201ENSMUST00000043767 SrprbP47758 269 aa26.6■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Map9Q3TRR0 646 aa26.6■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Zfp113Q8C689 439 aa26.6■■□□□ 1.85
Upf3a-201ENSMUST00000043767 DpydQ8CHR6 1025 aa26.6■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Trim59Q922Y2 403 aa26.6■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Kdm4aQ8BW72 1064 aa26.59■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Ush1cQ9ES64 910 aa26.59■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Cyp2c68K7N6C2 491 aa26.59■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Lins1Q3U1D0 764 aa26.59■■□□□ 1.85
Upf3a-201ENSMUST00000043767 VmacQ8BP01 174 aa26.59■■□□□ 1.85
Upf3a-201ENSMUST00000043767 DmtnQ9WV69 405 aa26.59■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Glt1d1A4FUP9 346 aa26.58■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Eya3P97480 510 aa26.58■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Ccdc93Q7TQK5 629 aa26.58■■□□□ 1.85
Upf3a-201ENSMUST00000043767 U2af1l4Q8BGJ9 220 aa26.58■■□□□ 1.85
Upf3a-201ENSMUST00000043767 DlatQ8BMF4 642 aa26.58■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Lonrf3Q9D4H7 753 aa26.58■■□□□ 1.85
Upf3a-201ENSMUST00000043767 Sall1Q9ER74 1322 aa26.58■■□□□ 1.85
Upf3a-201ENSMUST00000043767 CnpP16330 420 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 MyrflQ3UN70 904 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Tigd5Q499M4 642 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Fam196bQ6GQV1 535 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Ranbp6Q8BIV3 1105 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 OplahQ8K010 1288 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Hdac9Q99N13 588 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Mrpl44Q9CY73 333 aaKnown RBP26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Erich6bQ9D4S6 220 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Clip2Q9Z0H8 1047 aa26.58■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Wdr19Q3UGF1 1341 aa26.57■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Stx8O88983 236 aa26.57■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Kif4P33174 1231 aa26.57■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Gxylt1Q3UHH8 404 aa26.57■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Ncbp1Q3UYV9 790 aaKnown RBP26.57■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Ckap2Q3V1H1 664 aa26.57■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Peak1Q69Z38 1735 aa26.56■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Cep63Q3UPP8 700 aa26.56■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Lrrc2Q8VDB8 371 aa26.56■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Borcs6Q9D6W8 360 aa26.56■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Fdx1P46656 188 aa26.56■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Tmc4Q7TQ65 694 aa26.55■■□□□ 1.84
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms