RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Fam217aQ9D9W6 419 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Asap2Q7SIG6 958 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ranbp6Q8BIV3 1105 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Lrrd1Q8C0R9 853 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ccdc14Q8K2J4 934 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Rbm43Q99J64 343 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Nip7Q9CXK8 180 aaKnown RBP12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Zranb2Q9R020 330 aaKnown RBP12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pald1P70261 859 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Llgl2Q3TJ91 1027 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cfap69Q8BH53 942 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 ApobrQ8VBT6 942 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Card14Q99KF0 999 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Sar1bQ9CQC9 198 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 ErmardE9Q048 622 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pcdhb9E9Q5G2 828 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 RargP18911 458 aaKnown RBP12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Krt86P97861 486 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tmem59lQ7TNI2 337 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cep128Q8BI22 1102 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Rab3il1Q8VDV3 383 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ccne2Q9Z238 404 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 MypnQ5DTJ9 1315 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Samd15F6XZJ7 620 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 CrklP47941 303 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Mrps31Q61733 384 aaKnown RBP12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tc2nQ91XT6 489 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Sirt1Q923E4 737 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Mast3Q3U214 1321 aa12.76□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Enox1Q8BHR2 643 aaKnown RBP12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Themis2Q91YX0 663 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Riok1Q922Q2 567 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Thap2Q9D305 217 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Api5O35841 504 aaKnown RBP12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Adssl1P28650 457 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Lrsam1Q80ZI6 727 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Dennd3A2RT67 1274 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 ByslO54825 436 aaKnown RBP12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Atf3Q60765 181 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Exoc1Q8R3S6 894 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pold4Q9CWP8 107 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Stx17Q9D0I4 301 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Prl3d2F6R3P9 224 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ddx49Q4FZF3 480 aaKnown RBP12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Vps37dQ810I0 261 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Eaf2Q91ZD6 262 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tcp11Q01755 566 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Arhgef2Q60875 985 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Epn1Q80VP1 575 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ppp1r37Q8BKR5 712 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Dact1Q8R4A3 778 aa12.75□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Depdc5P61460 1591 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ahdc1Q6PAL7 1594 aaKnown RBP12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cdc42bpgQ80UW5 1551 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 AglF8VPN4 1532 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 MarcksP26645 309 aaKnown RBP12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Nek1P51954 1203 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Kifap3P70188 793 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Nlrp2Q4PLS0 1046 aaKnown RBP12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Sh2b1Q91ZM2 756 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Krtap5-3Q9D226 196 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 MycbpQ9EQS3 103 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Hic2Q9JLZ6 619 aaKnown RBP12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Chp1P61022 195 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Iqsec3Q3TES0 1195 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Prl2c1Q5SVL9 228 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 NelfbQ8C4Y3 580 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Dnajc17Q91WT4 303 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 KynuQ9CXF0 464 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ube3aO08759 870 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Myo1aO88329 1043 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pde6aP27664 859 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Eva1cP58659 440 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Mdh1bQ5F204 500 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Slc27a1Q60714 646 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Mkrn1Q9QXP6 481 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Npc1l1Q6T3U4 1333 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Phldb3E9QAF4 648 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ccdc122Q8BVN0 290 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tpcn1Q9EQJ0 817 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 IcoslgQ9JHJ8 322 aa12.74□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Parp14Q2EMV9 1817 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pak1O88643 545 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Slc4a1P04919 929 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Gfpt1P47856 697 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Prkag3Q8BGM7 489 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ugt1a8D3Z748 530 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ugt1a10E9PXN7 530 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Pth1rP41593 591 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Gpr182P43142 395 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ccdc42Q5SV66 316 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 NntQ61941 1086 aaKnown RBP12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 CemipQ8BI06 1361 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tecpr2Q3UH45 1423 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ercc6l2Q9JIM3 1537 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Cdr2P97817 455 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Madcam1Q61826 405 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Sept12Q9D451 317 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Homer1Q9Z2Y3 366 aa12.73□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Gm28510A0A087WP28 240 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 103.2 ms