RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Pfkfb1P70266 471 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tex35Q14BK3 207 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Camsap3Q80VC9 1252 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 NelfbQ8C4Y3 580 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Gimap7Q8R379 293 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Cabp7Q91ZM8 215 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Asic2Q925H0 512 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Rbm33Q9CXK9 1231 aaKnown RBP18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Uggt2E9Q4X2 1504 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tuft1O08970 390 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Kif22Q3V300 660 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 TrhQ62361 256 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Enox2Q8R0Z2 598 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tmem119Q8R138 280 aa18.51■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Cyp26a1O55127 497 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Atp2a2O55143 1044 aaKnown RBP18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Kif5cP28738 956 aaKnown RBP18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 ErmnQ5EBJ4 281 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tgfb1i1Q62219 461 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Mtss1lQ6P9S0 715 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Trim6Q8BGE7 488 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Bbs5Q9CZQ9 341 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Usp19Q3UJD6 1360 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Krt18P05784 423 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Spata18Q0P557 537 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Clcn1Q64347 994 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Kiaa1328Q6NZK5 612 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Ncoa5Q91W39 579 aaKnown RBP18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Abca5Q8K448 1642 aa18.5■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Gm20425E9Q035 978 aaKnown RBP18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Cbfa2t2O70374 594 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 SrprbP47758 269 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Mcm5P49718 733 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Cdr2P97817 455 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Npc1l1Q6T3U4 1333 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 VimP20152 466 aaKnown RBP18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 SbdsP70122 250 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Krt77Q6IFZ6 572 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 SphkapQ6NSW3 1687 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Gpr161B2RPY5 545 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 HhatQ8BMT9 499 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 EhhadhQ9DBM2 718 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Gsta4P24472 222 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Eif3j1Q3UGC7 261 aaKnown RBP18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Ctnna3Q65CL1 895 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Eif3j2Q66JS6 263 aa18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Nucks1Q80XU3 234 aaKnown RBP18.49■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Eif4g3Q80XI3 1579 aaKnown RBP18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Dnajc25A2ALW5 357 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Mtx1P47802 317 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Bach2P97303 839 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Sap30bpQ02614 308 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tbc1d9bQ5SVR0 1263 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Atad2Q8CDM1 1040 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Wdr24Q8CFJ9 790 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Cyp2j7A0A140T8U1 504 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Zscan25B2RX31 543 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Bola3Q8CEI1 110 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Hdac6Q9Z2V5 1149 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Arhgef11Q68FM7 1552 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Gucy1b3O54865 620 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Stn1Q8K2X3 378 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Acot11Q8VHQ9 594 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Nop56Q9D6Z1 580 aaKnown RBP18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 AW822073A0A0N4SUK1 652 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Foxp1P58462 705 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Bach1P97302 739 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Unc5clQ6R653 518 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Galnt17Q7TT15 598 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Dcaf5Q80T85 946 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Ttc27Q8CD92 847 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tnpo2Q99LG2 887 aaKnown RBP18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Mtmr7Q9Z2C9 660 aa18.48■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Plcb3P51432 1234 aaKnown RBP18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Ccdc57Q6PHN1 1016 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Vat1lQ80TB8 417 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Sdccag8Q80UF4 717 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Riox2Q8CD15 465 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 HmcesQ8R1M0 353 aaKnown RBP18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Igsf1Q7TQA1 1317 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tbc1d4Q8BYJ6 1307 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Gm38392E9Q2A2 434 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Nxf1Q99JX7 618 aaKnown RBP18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Ebag9Q9D0V7 213 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 FancaQ9JL70 1439 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Vwa3bJ9JI28 736 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Eftud2O08810 971 aaKnown RBP18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 HelbQ6NVF4 1074 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Mkrn1Q9QXP6 481 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Myom2Q14BI5 1463 aa18.47■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Ift20Q61025 132 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Krt20Q9D312 431 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Rhpn1Q61085 643 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Micall1Q8BGT6 870 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Stac3Q8BZ71 360 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tubgcp2Q921G8 905 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Ms4a1P19437 291 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Stxbp3Q60770 592 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Slc7a6osQ7TPE5 306 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Cd2bp2Q9CWK3 342 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms