RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Ift122Q6NWV3 1182 aa11.52□□□□□ -0.56
Rnft1-201ENSMUST00000020827 Bcas3Q8CCN5 928 aa11.52□□□□□ -0.56
Rnft1-201ENSMUST00000020827 Ddx27Q921N6 760 aaKnown RBP11.52□□□□□ -0.56
Rnft1-201ENSMUST00000020827 Tal1P22091 329 aa11.52□□□□□ -0.56
Rnft1-201ENSMUST00000020827 Cdk4P30285 303 aa11.52□□□□□ -0.56
Rnft1-201ENSMUST00000020827 Tab2Q99K90 693 aa11.52□□□□□ -0.56
Rnft1-201ENSMUST00000020827 Polr2dQ9D7M8 142 aaKnown RBP11.52□□□□□ -0.56
Rnft1-201ENSMUST00000020827 C4bP01029 1738 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ell2Q3UKU1 639 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Cep120Q7TSG1 988 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Pus7lQ8CE46 702 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Nod2Q8K3Z0 1020 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Trim34aQ99PP6 485 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Scn9aQ62205 1984 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Csrnp2Q8BGQ2 534 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Dnm3Q8BZ98 863 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Mtmr3Q8K296 1196 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ppil4Q9CXG3 492 aaKnown RBP11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Plekho1Q9JIY0 408 aa11.52□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Cacna1sQ02789 1880 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Rbbp6P97868 1790 aaKnown RBP11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Fkbp1aP26883 108 aaKnown RBP11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Rps6ka5Q8C050 863 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Setdb2Q8C267 713 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Calhm4Q8CE93 315 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Luzp1Q8R4U7 1068 aaKnown RBP11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Dhx30Q99PU8 1217 aaKnown RBP11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 PtmsQ9D0J8 101 aaKnown RBP11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Klrc1Q9Z202 244 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Myh14Q6URW6 2000 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Nme9A0A1L1SUL6 329 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 TrdnE9Q9K5 693 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Tpd52l1O54818 204 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Pla2g4bP0C871 782 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Cbx1P83917 185 aaKnown RBP11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Dok7Q18PE0 504 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ccdc162pQ0VG85 912 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Gse1Q3U3C9 1213 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ankrd40Q5SUE8 363 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Zfp91Q62511 572 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 SowahdQ8BY98 327 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Znf428Q8C1M2 176 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 RadxQ8C779 850 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Sumf1Q8R0F3 372 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ears2Q9CXJ1 523 aa11.51□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Gm43638A0A0J9YU36 694 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ftl1P29391 183 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ccdc51Q3URS9 406 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Mars2Q499X9 586 aaKnown RBP11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ttc27Q8CD92 847 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Tut1Q8R3F9 869 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Mtmr6Q8VE11 617 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 PdcQ9QW08 244 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Chd5A2A8L1 1946 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 CrcpO35427 148 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Irx2P81066 474 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ovgp1Q62010 721 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Zbtb39Q6PDK0 712 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Hps6Q8BLY7 805 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 ZgpatQ8VDM1 511 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Myh13B1AR69 1938 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Clec11aO88200 328 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Desi2Q9D291 194 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Cd3dP04235 173 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 McamQ8R2Y2 648 aaKnown RBP11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ltbp2O08999 1813 aa11.5□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Eif6O55135 245 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Stx8O88983 236 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 MybP06876 636 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Prpf4bQ61136 1007 aaKnown RBP11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Zdhhc14Q8BQQ1 489 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Nyap1Q6PFX7 833 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Med23Q80YQ2 1367 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Fam184aE9PW83 1143 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Znf568E9PYI1 671 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Lmod3E9QA62 571 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Msl1Q6PDM1 616 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Atxn2lQ7TQH0 1049 aaKnown RBP11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Prr16A3KMN5 304 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Rrp1P56183 494 aaKnown RBP11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Psmb7P70195 277 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Arid3aQ62431 601 aa11.49□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Map3k15A2AQW0 1331 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 A430078G23RikE9Q7Y4 484 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Cfap157Q0VFX2 523 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Vps37dQ810I0 261 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Nup133Q8R0G9 1155 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Glipr1l2Q9CQ35 332 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Naa16Q9DBB4 864 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Ppfibp2O35711 882 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Cacnb3P54285 484 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Myl6bQ8CI43 207 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Pcdhb22Q91XZ8 794 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Gm5134E9QAB5 671 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Tmem132bF7BAB2 1078 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Speer4dL7N216 212 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 ParvgQ9ERD8 331 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Kat6bQ8BRB7 1872 aa11.48□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Zmym2Q9CU65 1376 aa11.47□□□□□ -0.57
Rnft1-201ENSMUST00000020827 Paxbp1P58501 919 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms