RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Ugt1a6Q64435 531 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Ugt1a7cQ6ZQM8 531 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Pdcd6ipQ9WU78 869 aaKnown RBP10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 AK157302I3ITR1 129 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Pde11aP0C1Q2 933 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Plbd2Q3TCN2 594 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Vps37dQ810I0 261 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Inpp5bQ8K337 993 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Isca1Q9D924 129 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 GdaQ9R111 454 aa10.72□□□□□ -0.69
Col6a1-201ENSMUST00000001147 A0A1Y7VML8 143 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Anks1aP59672 1150 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Pcdhb14Q6PB90 796 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Gimap8Q75N62 688 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Cep128Q8BI22 1102 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Ints4Q8CIM8 964 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Paf1Q8K2T8 535 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Exoc1Q8R3S6 894 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Epb41l2O70318 988 aaKnown RBP10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Usp5P56399 858 aaKnown RBP10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 HmmrQ00547 794 aaKnown RBP10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Ssrp1Q08943 708 aaKnown RBP10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Ccdc57Q6PHN1 1016 aa10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Ddx41Q91VN6 622 aaKnown RBP10.71□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Nfil3O08750 462 aa10.71□□□□□ -0.7
Col6a1-201ENSMUST00000001147 PsdQ5DTT2 1024 aa10.71□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Haus7Q8BKT8 364 aa10.71□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cadps2Q8BYR5 1297 aa10.71□□□□□ -0.7
Col6a1-201ENSMUST00000001147 PdclQ9DBX2 301 aa10.71□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cyp2d34L7N463 504 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Smarcc1P97496 1104 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Asic1Q6NXK8 526 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Jade2Q6ZQF7 829 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ssfa2Q922B9 1252 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Telo2Q9DC40 840 aaKnown RBP10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Stk39Q9Z1W9 556 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Knop1Q9Z2Q2 478 aaKnown RBP10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Kif1aP33173 1695 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Grin2dQ03391 1323 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 1700013D24RikQ0P521 120 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ncapg2Q6DFV1 1138 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Hexim1Q8R409 356 aaKnown RBP10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Rapgef3Q8VCC8 918 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Uso1Q9Z1Z0 959 aaKnown RBP10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Mroh6V9GX81 722 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Med23Q80YQ2 1367 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cdc37Q61081 379 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ctr9Q62018 1173 aaKnown RBP10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Map10Q8BJS7 891 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Rassf4Q8CB96 322 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ehd4Q9EQP2 541 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Lztfl1Q9JHQ5 299 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Dctpp1Q9QY93 170 aa10.7□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Madcam1Q61826 405 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ncoa7Q6DFV7 943 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Tmem59lQ7TNI2 337 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ccdc172Q810N9 267 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Smc1aQ9CU62 1233 aaKnown RBP10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 IkQ9Z1M8 557 aaKnown RBP10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Sik3Q6P4S6 1311 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gm7347D3YYI9 267 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 1700029H14RikE9PY36 240 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Speer4aF8VPX6 267 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ints5Q8CHT3 1018 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cd209bQ8CJ91 325 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Pcdha7Q91Y13 937 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Rnf34Q99KR6 376 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Kiaa0232Q80U59 1396 aaKnown RBP10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gm4340L7N2C4 268 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 CltaO08585 235 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Dynll1P63168 89 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Top1Q04750 767 aaKnown RBP10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Apol10aQ8CCA5 318 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Sept12Q9D451 317 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Tbc1d2B1AVH7 922 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Otud7bB2RUR8 840 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Exoc3l2D3YUP5 789 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Sept1P42209 366 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Otop3Q80UF9 577 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 FliiQ9JJ28 1271 aa10.69□□□□□ -0.7
Col6a1-201ENSMUST00000001147 CtifQ6PEE2 600 aaKnown RBP10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Caps2Q8BUG5 550 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cnpy3Q9DAU1 276 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Arpp21Q9DCB4 807 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Hic2Q9JLZ6 619 aaKnown RBP10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cyp3a59D3Z2W7 503 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Pak1O88643 545 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Surf1P09925 306 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Evi5P97366 809 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ddb1Q3U1J4 1140 aaKnown RBP10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Lrrcc1Q69ZB0 1026 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gimap5Q8BWF2 308 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 NelfbQ8C4Y3 580 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Krt24A1L317 512 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Fam186bD3Z420 943 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cyp19a1P28649 503 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cct6aP80317 531 aaKnown RBP10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Lrrfip1Q3UZ39 729 aaKnown RBP10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Arhgef2Q60875 985 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Edrf1Q6GQV7 1239 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms