RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm5941Q497P9 117 aa8.9□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gpx7Q99LJ6 186 aa8.9□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Rs1Q9Z1L4 224 aa8.9□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Igkv4-90A0A075B5L3 117 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Ighv1-77A0A0G2JGS9 117 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 1520401A03RikA0A0J9YVH6 598 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 P01896 185 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Atxn7l1Q9CZ05 146 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Bub3Q9WVA3 326 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Nf1Q04690 2841 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Tcrg-V6A0A075B5Y8 134 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 TgfaP48030 159 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Ndufa4l2Q4FZG9 87 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Defa37K9J724 93 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Defa5P28312 93 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 7420426K07RikQ3UX66 186 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 E130116L18RikQ8BMV6 101 aa8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Rpl11Q9CXW4 178 aaKnown RBP8.89□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Ighv1-22A0A075B5U7 117 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Igkv4-57A0A0A6YYE7 117 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 PspnO70300 156 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 CrygbP04344 175 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Tdgf1P51865 171 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Defa24Q5G865 93 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Hrct1Q9D6B9 109 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Igfn1Q3KNY0 2849 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gm12845A0A0N4SUM5 588 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Defb30Q30KN4 75 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Trav7-2Q5R1I3 112 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Minos1Q7TNS2 76 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gkn1Q9CR36 201 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 HilpdaQ9JLS0 64 aa8.88□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Hint1P70349 126 aaKnown RBP8.87□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gm16223Q8CBM3 117 aa8.87□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Odf3Q920N1 254 aa8.87□□□□□ -0.99
Col9a1-202ENSMUST00000088349 ApomQ9Z1R3 190 aa8.87□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gm45753A0A1C7CYU8 86 aa8.87□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Ighv1-62-3P01754 117 aa8.87□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Slamf6Q9ET39 351 aa8.87□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gm9970F6ZED4 185 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 S100a4P07091 101 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Nbl1Q61477 178 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Prr3Q811B5 190 aaKnown RBP8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Brd3osA0A1B0GRB6 84 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Tmem238lA0A1B0GS74 79 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Defa3P28310 93 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Defa10P50708 93 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Defa15P50713 93 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Hspe1Q64433 102 aaKnown RBP8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Cox11Q6P8I6 275 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Prss41Q920S2 322 aa8.86□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Ighv1-23A0A0A6YVW3 117 aa8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 P01741 114 aa8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Psmg4P0C7N9 123 aa8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 PolP10400 120 aa8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 P18527 97 aa8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Lelp1Q9DAE3 120 aa8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Prrc2aQ7TSC1 2158 aaKnown RBP8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Esp3J3QN49 87 aa8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Tcf24V9GWT9 166 aa8.85□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Tnfrsf23Q9ER63 176 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gm26938S4R185 226 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gm10271F6WY25 52 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Insl3O09107 122 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Fhl1P97447 280 aaKnown RBP8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Zfand3Q497H0 227 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Ang5Q5GAN1 145 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Srsf1Q6PDM2 248 aaKnown RBP8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Mrpl36Q99N90 102 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Snai3Q9QY31 287 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Obox8V9GWY9 217 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 MtorQ9JLN9 2549 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 1700056E22RikF7CNM6 234 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Gm5294J3QP53 216 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Ndufa1O35683 70 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Olfr312Q7TRZ9 308 aa8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Rbmxl2Q9DAE2 385 aaKnown RBP8.84□□□□□ -0.99
Col9a1-202ENSMUST00000088349 Tep1P97499 2629 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 P06334 169 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 Csn3P06796 181 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 Uqcrfs1Q9CR68 274 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 Igkv4-59A0A0B4J1I8 117 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 Trbv13-1A0A0B4J1P8 112 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 Tmem170bP86050 132 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 Parm1Q923D3 296 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 Q9CX25 107 aa8.83□□□□□ -1
Col9a1-202ENSMUST00000088349 BC067074F6RXI4 2391 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Igkv20-101-2A0A0G2JDU3 113 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Iglc1A0A0G2JE99 106 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 P01843 105 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Cela2aP05208 271 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 AW146154Q3TPQ7 468 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Q4KKZ1 196 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Pgpep1lQ9CWB5 130 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Rif1Q6PR54 2419 aaKnown RBP8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 TshbP12656 138 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Gm5464Q3UY29 175 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 CnfnQ6PCW6 111 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Mzt1Q8BUR9 78 aa8.82□□□□□ -1
Col9a1-202ENSMUST00000088349 Gm14137Q8CE97 175 aa8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms