RNA–Protein interactions for RNA: ENST00000641704.1

CASC19-252, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,313 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-252ENST00000641704 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
CASC19-252ENST00000641704 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
CASC19-252ENST00000641704 MT1XP80297 61 aa3.36□□□□□ -1.87
CASC19-252ENST00000641704 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
CASC19-252ENST00000641704 ROMO1P60602 79 aa3.35□□□□□ -1.87
CASC19-252ENST00000641704 TNP1P09430 55 aa3.34□□□□□ -1.87
CASC19-252ENST00000641704 MT3P25713 68 aa3.34□□□□□ -1.87
CASC19-252ENST00000641704 USH2AO75445 5202 aa3.33□□□□□ -1.88
CASC19-252ENST00000641704 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
CASC19-252ENST00000641704 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
CASC19-252ENST00000641704 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
CASC19-252ENST00000641704 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
CASC19-252ENST00000641704 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
CASC19-252ENST00000641704 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
CASC19-252ENST00000641704 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
CASC19-252ENST00000641704 FCGBPQ9Y6R7 5405 aaPredicted RBP3.15□□□□□ -1.9
CASC19-252ENST00000641704 NEBP20929 6669 aa3.14□□□□□ -1.91
CASC19-252ENST00000641704 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
CASC19-252ENST00000641704 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
CASC19-252ENST00000641704 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
CASC19-252ENST00000641704 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
CASC19-252ENST00000641704 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
CASC19-252ENST00000641704 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
CASC19-252ENST00000641704 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
CASC19-252ENST00000641704 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
CASC19-252ENST00000641704 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
CASC19-252ENST00000641704 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
CASC19-252ENST00000641704 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
CASC19-252ENST00000641704 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
CASC19-252ENST00000641704 KMT2DO14686 5537 aa2.98□□□□□ -1.93
CASC19-252ENST00000641704 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
CASC19-252ENST00000641704 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
CASC19-252ENST00000641704 MT1EP04732 61 aa2.96□□□□□ -1.93
CASC19-252ENST00000641704 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.93
CASC19-252ENST00000641704 SPRR2EP22531 72 aa2.91□□□□□ -1.94
CASC19-252ENST00000641704 SPRR2BP35325 72 aa2.91□□□□□ -1.94
CASC19-252ENST00000641704 SPRR2AP35326 72 aa2.91□□□□□ -1.94
CASC19-252ENST00000641704 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
CASC19-252ENST00000641704 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
CASC19-252ENST00000641704 MT1LQ93083 61 aa2.89□□□□□ -1.95
CASC19-252ENST00000641704 MT1GP13640 62 aa2.88□□□□□ -1.95
CASC19-252ENST00000641704 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
CASC19-252ENST00000641704 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.96
CASC19-252ENST00000641704 SPRR2DP22532 72 aa2.81□□□□□ -1.96
CASC19-252ENST00000641704 MT1MQ8N339 61 aa2.8□□□□□ -1.96
CASC19-252ENST00000641704 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
CASC19-252ENST00000641704 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
CASC19-252ENST00000641704 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
CASC19-252ENST00000641704 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
CASC19-252ENST00000641704 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
CASC19-252ENST00000641704 LCE3EQ5T5B0 92 aa2.59□□□□□ -2
CASC19-252ENST00000641704 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
CASC19-252ENST00000641704 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
CASC19-252ENST00000641704 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
CASC19-252ENST00000641704 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
CASC19-252ENST00000641704 MT1AP04731 61 aa2.48□□□□□ -2.01
CASC19-252ENST00000641704 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
CASC19-252ENST00000641704 MT4P47944 62 aa2.42□□□□□ -2.02
CASC19-252ENST00000641704 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
CASC19-252ENST00000641704 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
CASC19-252ENST00000641704 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
CASC19-252ENST00000641704 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
CASC19-252ENST00000641704 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
CASC19-252ENST00000641704 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
CASC19-252ENST00000641704 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
CASC19-252ENST00000641704 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
CASC19-252ENST00000641704 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
CASC19-252ENST00000641704 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
CASC19-252ENST00000641704 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
CASC19-252ENST00000641704 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
CASC19-252ENST00000641704 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
CASC19-252ENST00000641704 INE1O15225 51 aa2.08□□□□□ -2.08
CASC19-252ENST00000641704 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
CASC19-252ENST00000641704 PRM1P04553 51 aa1.7□□□□□ -2.14
CASC19-252ENST00000641704 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
CASC19-252ENST00000641704 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
CASC19-252ENST00000641704 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
CASC19-252ENST00000641704 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms