RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 J3QR89 54 aa4.11□□□□□ -1.75
CASC19-229ENST00000641418 A0A1B0GV90 55 aa4.1□□□□□ -1.75
CASC19-229ENST00000641418 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
CASC19-229ENST00000641418 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
CASC19-229ENST00000641418 CHKB-CPT1BH3BT56 60 aa4.05□□□□□ -1.76
CASC19-229ENST00000641418 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
CASC19-229ENST00000641418 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
CASC19-229ENST00000641418 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
CASC19-229ENST00000641418 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
CASC19-229ENST00000641418 SNURFQ9Y675 71 aa3.95□□□□□ -1.78
CASC19-229ENST00000641418 A0A1B0GU33 70 aa3.93□□□□□ -1.78
CASC19-229ENST00000641418 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
CASC19-229ENST00000641418 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
CASC19-229ENST00000641418 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.78
CASC19-229ENST00000641418 MT1EP04732 61 aa3.89□□□□□ -1.79
CASC19-229ENST00000641418 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
CASC19-229ENST00000641418 K7ERU9 68 aa3.88□□□□□ -1.79
CASC19-229ENST00000641418 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
CASC19-229ENST00000641418 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
CASC19-229ENST00000641418 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
CASC19-229ENST00000641418 A0A0D9SG42 100 aa3.84□□□□□ -1.79
CASC19-229ENST00000641418 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
CASC19-229ENST00000641418 SERP1Q9Y6X1 66 aa3.84□□□□□ -1.79
CASC19-229ENST00000641418 COA5Q86WW8 74 aa3.82□□□□□ -1.8
CASC19-229ENST00000641418 SERP2Q8N6R1 65 aa3.82□□□□□ -1.8
CASC19-229ENST00000641418 CYSTM1Q9H1C7 97 aa3.82□□□□□ -1.8
CASC19-229ENST00000641418 MT1GP13640 62 aa3.8□□□□□ -1.8
CASC19-229ENST00000641418 RPS28P62857 69 aaKnown RBP3.8□□□□□ -1.8
CASC19-229ENST00000641418 SPATA8Q6RVD6 105 aa3.8□□□□□ -1.8
CASC19-229ENST00000641418 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
CASC19-229ENST00000641418 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
CASC19-229ENST00000641418 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
CASC19-229ENST00000641418 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
CASC19-229ENST00000641418 MT1MQ8N339 61 aa3.72□□□□□ -1.81
CASC19-229ENST00000641418 MT1LQ93083 61 aa3.71□□□□□ -1.82
CASC19-229ENST00000641418 MT4P47944 62 aa3.7□□□□□ -1.82
CASC19-229ENST00000641418 COX7CP15954 63 aa3.66□□□□□ -1.82
CASC19-229ENST00000641418 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
CASC19-229ENST00000641418 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
CASC19-229ENST00000641418 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.83
CASC19-229ENST00000641418 A0A1B0GU69 56 aa3.64□□□□□ -1.83
CASC19-229ENST00000641418 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
CASC19-229ENST00000641418 H7BZZ5 65 aa3.63□□□□□ -1.83
CASC19-229ENST00000641418 TNP1P09430 55 aa3.63□□□□□ -1.83
CASC19-229ENST00000641418 TMEM258P61165 79 aa3.58□□□□□ -1.84
CASC19-229ENST00000641418 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
CASC19-229ENST00000641418 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
CASC19-229ENST00000641418 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
CASC19-229ENST00000641418 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
CASC19-229ENST00000641418 PRR15LQ9BU68 103 aa3.5□□□□□ -1.85
CASC19-229ENST00000641418 ROMO1P60602 79 aa3.46□□□□□ -1.86
CASC19-229ENST00000641418 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
CASC19-229ENST00000641418 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
CASC19-229ENST00000641418 LINC01558Q9Y6Z2 57 aa3.42□□□□□ -1.86
CASC19-229ENST00000641418 ATP5EP56381 51 aaPredicted RBP3.39□□□□□ -1.87
CASC19-229ENST00000641418 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
CASC19-229ENST00000641418 CCDC179H3BU77 68 aa3.38□□□□□ -1.87
CASC19-229ENST00000641418 UQCR11O14957 56 aa3.38□□□□□ -1.87
CASC19-229ENST00000641418 Q1T7F1 81 aa3.35□□□□□ -1.87
CASC19-229ENST00000641418 MIR22HGQ0VDD5 57 aa3.28□□□□□ -1.88
CASC19-229ENST00000641418 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
CASC19-229ENST00000641418 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
CASC19-229ENST00000641418 MT1AP04731 61 aa3.15□□□□□ -1.9
CASC19-229ENST00000641418 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
CASC19-229ENST00000641418 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
CASC19-229ENST00000641418 CDC42SE1Q9NRR8 79 aa3.06□□□□□ -1.92
CASC19-229ENST00000641418 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CASC19-229ENST00000641418 INE1O15225 51 aa2.97□□□□□ -1.93
CASC19-229ENST00000641418 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
CASC19-229ENST00000641418 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
CASC19-229ENST00000641418 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
CASC19-229ENST00000641418 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CASC19-229ENST00000641418 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
CASC19-229ENST00000641418 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
CASC19-229ENST00000641418 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.16
CASC19-229ENST00000641418 PRM1P04553 51 aa1.51□□□□□ -2.17
CASC19-229ENST00000641418 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 56.9 ms