RNA–Protein interactions for RNA: ENST00000641179.1

CASC19-216, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,140 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-216ENST00000641179 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
CASC19-216ENST00000641179 KRTAP19-8Q3LI54 63 aa3.55□□□□□ -1.84
CASC19-216ENST00000641179 A0A0D9SG42 100 aa3.52□□□□□ -1.85
CASC19-216ENST00000641179 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
CASC19-216ENST00000641179 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
CASC19-216ENST00000641179 ROMO1P60602 79 aa3.5□□□□□ -1.85
CASC19-216ENST00000641179 PLAC4Q8WY50 150 aa3.49□□□□□ -1.85
CASC19-216ENST00000641179 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
CASC19-216ENST00000641179 LINC01554Q52M75 96 aa3.45□□□□□ -1.86
CASC19-216ENST00000641179 MT1BP07438 61 aa3.44□□□□□ -1.86
CASC19-216ENST00000641179 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
CASC19-216ENST00000641179 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
CASC19-216ENST00000641179 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
CASC19-216ENST00000641179 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
CASC19-216ENST00000641179 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
CASC19-216ENST00000641179 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
CASC19-216ENST00000641179 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
CASC19-216ENST00000641179 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
CASC19-216ENST00000641179 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
CASC19-216ENST00000641179 USH2AO75445 5202 aa3.32□□□□□ -1.88
CASC19-216ENST00000641179 MT1XP80297 61 aa3.3□□□□□ -1.88
CASC19-216ENST00000641179 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
CASC19-216ENST00000641179 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
CASC19-216ENST00000641179 TNP1P09430 55 aa3.22□□□□□ -1.89
CASC19-216ENST00000641179 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
CASC19-216ENST00000641179 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
CASC19-216ENST00000641179 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
CASC19-216ENST00000641179 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
CASC19-216ENST00000641179 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
CASC19-216ENST00000641179 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
CASC19-216ENST00000641179 KRTAP19-7Q3SYF9 63 aa2.95□□□□□ -1.94
CASC19-216ENST00000641179 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
CASC19-216ENST00000641179 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
CASC19-216ENST00000641179 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
CASC19-216ENST00000641179 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
CASC19-216ENST00000641179 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CASC19-216ENST00000641179 MT1EP04732 61 aa2.91□□□□□ -1.94
CASC19-216ENST00000641179 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
CASC19-216ENST00000641179 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
CASC19-216ENST00000641179 MT1GP13640 62 aa2.88□□□□□ -1.95
CASC19-216ENST00000641179 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
CASC19-216ENST00000641179 MT1LQ93083 61 aa2.84□□□□□ -1.95
CASC19-216ENST00000641179 SPRR2EP22531 72 aa2.82□□□□□ -1.96
CASC19-216ENST00000641179 SPRR2BP35325 72 aa2.82□□□□□ -1.96
CASC19-216ENST00000641179 SPRR2AP35326 72 aa2.82□□□□□ -1.96
CASC19-216ENST00000641179 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
CASC19-216ENST00000641179 KMT2DO14686 5537 aa2.79□□□□□ -1.96
CASC19-216ENST00000641179 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
CASC19-216ENST00000641179 MT1MQ8N339 61 aa2.75□□□□□ -1.97
CASC19-216ENST00000641179 SPRR2DP22532 72 aa2.73□□□□□ -1.97
CASC19-216ENST00000641179 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
CASC19-216ENST00000641179 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
CASC19-216ENST00000641179 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
CASC19-216ENST00000641179 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
CASC19-216ENST00000641179 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
CASC19-216ENST00000641179 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
CASC19-216ENST00000641179 NEBP20929 6669 aa2.57□□□□□ -2
CASC19-216ENST00000641179 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
CASC19-216ENST00000641179 INE1O15225 51 aa2.46□□□□□ -2.02
CASC19-216ENST00000641179 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CASC19-216ENST00000641179 MT1AP04731 61 aa2.44□□□□□ -2.02
CASC19-216ENST00000641179 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
CASC19-216ENST00000641179 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
CASC19-216ENST00000641179 KRTAP6-1Q3LI64 71 aa2.36□□□□□ -2.03
CASC19-216ENST00000641179 MT4P47944 62 aa2.32□□□□□ -2.04
CASC19-216ENST00000641179 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
CASC19-216ENST00000641179 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
CASC19-216ENST00000641179 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
CASC19-216ENST00000641179 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
CASC19-216ENST00000641179 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.1
CASC19-216ENST00000641179 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
CASC19-216ENST00000641179 PRM1P04553 51 aa1.8□□□□□ -2.12
CASC19-216ENST00000641179 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
CASC19-216ENST00000641179 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
CASC19-216ENST00000641179 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CASC19-216ENST00000641179 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
CASC19-216ENST00000641179 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CASC19-216ENST00000641179 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 141.6 ms