RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 MUC12Q9UKN1 5478 aa6.88□□□□□ -1.31
SP3-208ENST00000640958 MT1GP13640 62 aa6.84□□□□□ -1.31
SP3-208ENST00000640958 MT1MQ8N339 61 aa6.83□□□□□ -1.32
SP3-208ENST00000640958 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
SP3-208ENST00000640958 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
SP3-208ENST00000640958 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
SP3-208ENST00000640958 KRTAP4-3Q9BYR4 195 aa6.79□□□□□ -1.32
SP3-208ENST00000640958 KRTAP9-6A0A140TA67 174 aa6.79□□□□□ -1.32
SP3-208ENST00000640958 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
SP3-208ENST00000640958 KRTAP2-3P0C7H8 128 aa6.65□□□□□ -1.35
SP3-208ENST00000640958 KRTAP2-4Q9BYR9 128 aa6.65□□□□□ -1.35
SP3-208ENST00000640958 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.35
SP3-208ENST00000640958 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
SP3-208ENST00000640958 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
SP3-208ENST00000640958 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
SP3-208ENST00000640958 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
SP3-208ENST00000640958 INE1O15225 51 aa6.45□□□□□ -1.38
SP3-208ENST00000640958 MDN1Q9NU22 5596 aa6.42□□□□□ -1.38
SP3-208ENST00000640958 SPRR2EP22531 72 aa6.35□□□□□ -1.39
SP3-208ENST00000640958 SPRR2BP35325 72 aa6.35□□□□□ -1.39
SP3-208ENST00000640958 SPRR2AP35326 72 aa6.35□□□□□ -1.39
SP3-208ENST00000640958 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
SP3-208ENST00000640958 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
SP3-208ENST00000640958 KRTAP6-3Q3LI67 103 aa6.26□□□□□ -1.41
SP3-208ENST00000640958 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
SP3-208ENST00000640958 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
SP3-208ENST00000640958 SPRR2DP22532 72 aa6.1□□□□□ -1.43
SP3-208ENST00000640958 MT1AP04731 61 aa6.1□□□□□ -1.43
SP3-208ENST00000640958 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
SP3-208ENST00000640958 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
SP3-208ENST00000640958 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
SP3-208ENST00000640958 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
SP3-208ENST00000640958 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
SP3-208ENST00000640958 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
SP3-208ENST00000640958 NEBP20929 6669 aa5.8□□□□□ -1.48
SP3-208ENST00000640958 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
SP3-208ENST00000640958 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
SP3-208ENST00000640958 KRTAP4-12Q9BQ66 201 aa5.69□□□□□ -1.5
SP3-208ENST00000640958 KRTAP4-6Q9BYQ5 205 aa5.63□□□□□ -1.51
SP3-208ENST00000640958 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
SP3-208ENST00000640958 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
SP3-208ENST00000640958 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
SP3-208ENST00000640958 MT3P25713 68 aa5.47□□□□□ -1.53
SP3-208ENST00000640958 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
SP3-208ENST00000640958 KRTAP20-1Q3LI63 56 aa5.33□□□□□ -1.56
SP3-208ENST00000640958 MT4P47944 62 aa5.32□□□□□ -1.56
SP3-208ENST00000640958 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
SP3-208ENST00000640958 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
SP3-208ENST00000640958 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
SP3-208ENST00000640958 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
SP3-208ENST00000640958 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
SP3-208ENST00000640958 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
SP3-208ENST00000640958 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
SP3-208ENST00000640958 PRM1P04553 51 aa5□□□□□ -1.61
SP3-208ENST00000640958 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
SP3-208ENST00000640958 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
SP3-208ENST00000640958 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
SP3-208ENST00000640958 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
SP3-208ENST00000640958 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.69
SP3-208ENST00000640958 GPR98Q8WXG9 6306 aa4.46□□□□□ -1.7
SP3-208ENST00000640958 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
SP3-208ENST00000640958 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
SP3-208ENST00000640958 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
SP3-208ENST00000640958 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
SP3-208ENST00000640958 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
SP3-208ENST00000640958 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
SP3-208ENST00000640958 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
SP3-208ENST00000640958 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
SP3-208ENST00000640958 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
SP3-208ENST00000640958 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SP3-208ENST00000640958 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
SP3-208ENST00000640958 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
SP3-208ENST00000640958 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
SP3-208ENST00000640958 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
SP3-208ENST00000640958 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
SP3-208ENST00000640958 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
SP3-208ENST00000640958 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms