RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 LRP1BQ9NZR2 4599 aa1.56□□□□□ -2.16
TCF4-290ENST00000638154 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
TCF4-290ENST00000638154 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
TCF4-290ENST00000638154 KRTAP4-9Q9BYQ8 210 aa1.55□□□□□ -2.16
TCF4-290ENST00000638154 APOBP04114 4563 aaKnown RBP1.55□□□□□ -2.16
TCF4-290ENST00000638154 MT1XP80297 61 aa1.54□□□□□ -2.16
TCF4-290ENST00000638154 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
TCF4-290ENST00000638154 KRTAP2-2Q9BYT5 123 aa1.54□□□□□ -2.16
TCF4-290ENST00000638154 PKD1P98161 4303 aa1.53□□□□□ -2.16
TCF4-290ENST00000638154 SACSQ9NZJ4 4579 aa1.53□□□□□ -2.16
TCF4-290ENST00000638154 SPRR2FQ96RM1 72 aa1.53□□□□□ -2.16
TCF4-290ENST00000638154 KRTAP5-3Q6L8H2 238 aa1.52□□□□□ -2.17
TCF4-290ENST00000638154 DNAH5Q8TE73 4624 aa1.52□□□□□ -2.17
TCF4-290ENST00000638154 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
TCF4-290ENST00000638154 MT2AP02795 61 aa1.52□□□□□ -2.17
TCF4-290ENST00000638154 MT1LQ93083 61 aa1.5□□□□□ -2.17
TCF4-290ENST00000638154 MT1FP04733 61 aa1.5□□□□□ -2.17
TCF4-290ENST00000638154 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
TCF4-290ENST00000638154 KRTAP19-1Q8IUB9 90 aa1.48□□□□□ -2.17
TCF4-290ENST00000638154 KRTAP9-8Q9BYQ0 159 aa1.48□□□□□ -2.17
TCF4-290ENST00000638154 FAT1Q14517 4588 aa1.48□□□□□ -2.17
TCF4-290ENST00000638154 MT1HP80294 61 aa1.47□□□□□ -2.17
TCF4-290ENST00000638154 LRP1Q07954 4544 aaKnown RBP1.47□□□□□ -2.17
TCF4-290ENST00000638154 SPRR2DP22532 72 aa1.47□□□□□ -2.17
TCF4-290ENST00000638154 SPRR2AP35326 72 aa1.46□□□□□ -2.18
TCF4-290ENST00000638154 KRTAP19-8Q3LI54 63 aa1.44□□□□□ -2.18
TCF4-290ENST00000638154 MT1AP04731 61 aa1.44□□□□□ -2.18
TCF4-290ENST00000638154 MYCBP2O75592 4640 aa1.44□□□□□ -2.18
TCF4-290ENST00000638154 SPRR2BP35325 72 aa1.43□□□□□ -2.18
TCF4-290ENST00000638154 MT1EP04732 61 aa1.42□□□□□ -2.18
TCF4-290ENST00000638154 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
TCF4-290ENST00000638154 OBSCNQ5VST9 7968 aa1.42□□□□□ -2.18
TCF4-290ENST00000638154 KRTAP9-6A8MVA2 160 aa1.42□□□□□ -2.18
TCF4-290ENST00000638154 KRTAP9-3Q9BYQ3 159 aa1.4□□□□□ -2.19
TCF4-290ENST00000638154 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
TCF4-290ENST00000638154 SPRR2EP22531 72 aa1.39□□□□□ -2.19
TCF4-290ENST00000638154 MUC12Q9UKN1 5478 aa1.39□□□□□ -2.19
TCF4-290ENST00000638154 MT1BP07438 61 aa1.38□□□□□ -2.19
TCF4-290ENST00000638154 KRTAP4-11Q9BYQ6 195 aa1.38□□□□□ -2.19
TCF4-290ENST00000638154 KRTAP4-3Q9BYR4 195 aa1.38□□□□□ -2.19
TCF4-290ENST00000638154 LPAP08519 4548 aa1.35□□□□□ -2.19
TCF4-290ENST00000638154 KRTAP19-3Q7Z4W3 81 aa1.35□□□□□ -2.19
TCF4-290ENST00000638154 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
TCF4-290ENST00000638154 MT1MQ8N339 61 aa1.32□□□□□ -2.2
TCF4-290ENST00000638154 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
TCF4-290ENST00000638154 MUC17Q685J3 4493 aa1.24□□□□□ -2.21
TCF4-290ENST00000638154 KRTAP6-1Q3LI64 71 aa1.24□□□□□ -2.21
TCF4-290ENST00000638154 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
TCF4-290ENST00000638154 MT4P47944 62 aa1.2□□□□□ -2.22
TCF4-290ENST00000638154 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
TCF4-290ENST00000638154 KRTAP19-7Q3SYF9 63 aa1.2□□□□□ -2.22
TCF4-290ENST00000638154 DSTQ03001 7570 aaKnown RBP1.2□□□□□ -2.22
TCF4-290ENST00000638154 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
TCF4-290ENST00000638154 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
TCF4-290ENST00000638154 KRTAP5-5Q701N2 237 aaPredicted RBP1.18□□□□□ -2.22
TCF4-290ENST00000638154 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
TCF4-290ENST00000638154 FSIP2Q5CZC0 6907 aa1.16□□□□□ -2.22
TCF4-290ENST00000638154 SYNE2Q8WXH0 6885 aaKnown RBP1.15□□□□□ -2.23
TCF4-290ENST00000638154 MACF1Q9UPN3 7388 aaKnown RBP1.11□□□□□ -2.23
TCF4-290ENST00000638154 KRTAP19-2Q3LHN2 52 aa1.08□□□□□ -2.24
TCF4-290ENST00000638154 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
TCF4-290ENST00000638154 KRTAP19-6Q3LI70 58 aa1.08□□□□□ -2.24
TCF4-290ENST00000638154 KRTAP5-9P26371 169 aa1.07□□□□□ -2.24
TCF4-290ENST00000638154 KRTAP5-4Q6L8H1 288 aa1.07□□□□□ -2.24
TCF4-290ENST00000638154 KRTAP20-2Q3LI61 65 aa1.06□□□□□ -2.24
TCF4-290ENST00000638154 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
TCF4-290ENST00000638154 KRTAP4-4Q9BYR3 166 aa1.04□□□□□ -2.24
TCF4-290ENST00000638154 KRTAP5-11Q6L8G4 156 aa1.02□□□□□ -2.25
TCF4-290ENST00000638154 KRTAP5-1Q6L8H4 278 aa0.92□□□□□ -2.26
TCF4-290ENST00000638154 NEBP20929 6669 aa0.88□□□□□ -2.27
TCF4-290ENST00000638154 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.28
TCF4-290ENST00000638154 KRTAP5-8O75690 187 aa0.82□□□□□ -2.28
TCF4-290ENST00000638154 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
TCF4-290ENST00000638154 KRTAP5-7Q6L8G8 165 aa0.78□□□□□ -2.28
TCF4-290ENST00000638154 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
TCF4-290ENST00000638154 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
TCF4-290ENST00000638154 KRTAP21-2Q3LI59 83 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 88.8 ms