RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 KRTAP2-1Q9BYU5 128 aa6.98□□□□□ -1.29
SYNGAP1-227ENST00000638142 FCGBPQ9Y6R7 5405 aaPredicted RBP6.96□□□□□ -1.3
SYNGAP1-227ENST00000638142 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
SYNGAP1-227ENST00000638142 MT1LQ93083 61 aa6.94□□□□□ -1.3
SYNGAP1-227ENST00000638142 MT1EP04732 61 aa6.92□□□□□ -1.3
SYNGAP1-227ENST00000638142 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.32
SYNGAP1-227ENST00000638142 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.33
SYNGAP1-227ENST00000638142 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
SYNGAP1-227ENST00000638142 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
SYNGAP1-227ENST00000638142 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
SYNGAP1-227ENST00000638142 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
SYNGAP1-227ENST00000638142 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
SYNGAP1-227ENST00000638142 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
SYNGAP1-227ENST00000638142 MT1MQ8N339 61 aa6.45□□□□□ -1.38
SYNGAP1-227ENST00000638142 MT1GP13640 62 aa6.45□□□□□ -1.38
SYNGAP1-227ENST00000638142 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
SYNGAP1-227ENST00000638142 KRTAP6-3Q3LI67 103 aa6.31□□□□□ -1.4
SYNGAP1-227ENST00000638142 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
SYNGAP1-227ENST00000638142 KRTAP12-4P60329 112 aa6.19□□□□□ -1.42
SYNGAP1-227ENST00000638142 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
SYNGAP1-227ENST00000638142 SPRR2FQ96RM1 72 aa6.12□□□□□ -1.43
SYNGAP1-227ENST00000638142 NEBP20929 6669 aa6.11□□□□□ -1.43
SYNGAP1-227ENST00000638142 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
SYNGAP1-227ENST00000638142 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
SYNGAP1-227ENST00000638142 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
SYNGAP1-227ENST00000638142 MT1AP04731 61 aa5.93□□□□□ -1.46
SYNGAP1-227ENST00000638142 SPRR2EP22531 72 aa5.88□□□□□ -1.47
SYNGAP1-227ENST00000638142 SPRR2BP35325 72 aa5.88□□□□□ -1.47
SYNGAP1-227ENST00000638142 SPRR2AP35326 72 aa5.88□□□□□ -1.47
SYNGAP1-227ENST00000638142 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
SYNGAP1-227ENST00000638142 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
SYNGAP1-227ENST00000638142 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
SYNGAP1-227ENST00000638142 KRTAP20-1Q3LI63 56 aa5.79□□□□□ -1.48
SYNGAP1-227ENST00000638142 LCE3DQ9BYE3 92 aa5.73□□□□□ -1.49
SYNGAP1-227ENST00000638142 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
SYNGAP1-227ENST00000638142 KRTAP5-5Q701N2 237 aaPredicted RBP5.71□□□□□ -1.5
SYNGAP1-227ENST00000638142 SPRR2DP22532 72 aa5.67□□□□□ -1.5
SYNGAP1-227ENST00000638142 LCE3EQ5T5B0 92 aa5.67□□□□□ -1.5
SYNGAP1-227ENST00000638142 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
SYNGAP1-227ENST00000638142 PRM1P04553 51 aa5.5□□□□□ -1.53
SYNGAP1-227ENST00000638142 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
SYNGAP1-227ENST00000638142 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
SYNGAP1-227ENST00000638142 MT3P25713 68 aa5.25□□□□□ -1.57
SYNGAP1-227ENST00000638142 MT4P47944 62 aa5.02□□□□□ -1.61
SYNGAP1-227ENST00000638142 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
SYNGAP1-227ENST00000638142 HMCN1Q96RW7 5635 aa5□□□□□ -1.61
SYNGAP1-227ENST00000638142 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
SYNGAP1-227ENST00000638142 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
SYNGAP1-227ENST00000638142 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
SYNGAP1-227ENST00000638142 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
SYNGAP1-227ENST00000638142 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
SYNGAP1-227ENST00000638142 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
SYNGAP1-227ENST00000638142 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
SYNGAP1-227ENST00000638142 AHNAK2Q8IVF2 5795 aa4.66□□□□□ -1.66
SYNGAP1-227ENST00000638142 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
SYNGAP1-227ENST00000638142 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
SYNGAP1-227ENST00000638142 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
SYNGAP1-227ENST00000638142 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
SYNGAP1-227ENST00000638142 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
SYNGAP1-227ENST00000638142 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
SYNGAP1-227ENST00000638142 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
SYNGAP1-227ENST00000638142 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
SYNGAP1-227ENST00000638142 KRTAP5-8O75690 187 aa4.09□□□□□ -1.76
SYNGAP1-227ENST00000638142 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
SYNGAP1-227ENST00000638142 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
SYNGAP1-227ENST00000638142 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
SYNGAP1-227ENST00000638142 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.8
SYNGAP1-227ENST00000638142 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
SYNGAP1-227ENST00000638142 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
SYNGAP1-227ENST00000638142 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
SYNGAP1-227ENST00000638142 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
SYNGAP1-227ENST00000638142 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
SYNGAP1-227ENST00000638142 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
SYNGAP1-227ENST00000638142 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
SYNGAP1-227ENST00000638142 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
SYNGAP1-227ENST00000638142 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SYNGAP1-227ENST00000638142 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
SYNGAP1-227ENST00000638142 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms