RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-215ENST00000637657 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
PCCA-215ENST00000637657 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
PCCA-215ENST00000637657 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
PCCA-215ENST00000637657 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
PCCA-215ENST00000637657 MT1LQ93083 61 aa4.31□□□□□ -1.72
PCCA-215ENST00000637657 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
PCCA-215ENST00000637657 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
PCCA-215ENST00000637657 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
PCCA-215ENST00000637657 MT1EP04732 61 aa4.26□□□□□ -1.73
PCCA-215ENST00000637657 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
PCCA-215ENST00000637657 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
PCCA-215ENST00000637657 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
PCCA-215ENST00000637657 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
PCCA-215ENST00000637657 USH2AO75445 5202 aa4.14□□□□□ -1.75
PCCA-215ENST00000637657 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
PCCA-215ENST00000637657 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
PCCA-215ENST00000637657 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
PCCA-215ENST00000637657 FCGBPQ9Y6R7 5405 aaPredicted RBP4.07□□□□□ -1.76
PCCA-215ENST00000637657 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
PCCA-215ENST00000637657 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
PCCA-215ENST00000637657 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
PCCA-215ENST00000637657 MT1AP04731 61 aa4.01□□□□□ -1.77
PCCA-215ENST00000637657 MT1GP13640 62 aa3.96□□□□□ -1.78
PCCA-215ENST00000637657 KMT2DO14686 5537 aa3.94□□□□□ -1.78
PCCA-215ENST00000637657 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
PCCA-215ENST00000637657 MT1MQ8N339 61 aa3.92□□□□□ -1.78
PCCA-215ENST00000637657 MT3P25713 68 aa3.88□□□□□ -1.79
PCCA-215ENST00000637657 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
PCCA-215ENST00000637657 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
PCCA-215ENST00000637657 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
PCCA-215ENST00000637657 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
PCCA-215ENST00000637657 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
PCCA-215ENST00000637657 NEBP20929 6669 aa3.84□□□□□ -1.8
PCCA-215ENST00000637657 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
PCCA-215ENST00000637657 PRM1P04553 51 aa3.82□□□□□ -1.8
PCCA-215ENST00000637657 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
PCCA-215ENST00000637657 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
PCCA-215ENST00000637657 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
PCCA-215ENST00000637657 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
PCCA-215ENST00000637657 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
PCCA-215ENST00000637657 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
PCCA-215ENST00000637657 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
PCCA-215ENST00000637657 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
PCCA-215ENST00000637657 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
PCCA-215ENST00000637657 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
PCCA-215ENST00000637657 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
PCCA-215ENST00000637657 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
PCCA-215ENST00000637657 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
PCCA-215ENST00000637657 SPRR2AP35326 72 aa3.44□□□□□ -1.86
PCCA-215ENST00000637657 SPRR2EP22531 72 aa3.4□□□□□ -1.87
PCCA-215ENST00000637657 SPRR2BP35325 72 aa3.4□□□□□ -1.87
PCCA-215ENST00000637657 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
PCCA-215ENST00000637657 SPRR2DP22532 72 aa3.29□□□□□ -1.88
PCCA-215ENST00000637657 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
PCCA-215ENST00000637657 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
PCCA-215ENST00000637657 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
PCCA-215ENST00000637657 MT4P47944 62 aa2.9□□□□□ -1.94
PCCA-215ENST00000637657 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
PCCA-215ENST00000637657 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
PCCA-215ENST00000637657 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
PCCA-215ENST00000637657 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
PCCA-215ENST00000637657 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
PCCA-215ENST00000637657 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
PCCA-215ENST00000637657 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
PCCA-215ENST00000637657 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
PCCA-215ENST00000637657 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
PCCA-215ENST00000637657 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
PCCA-215ENST00000637657 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
PCCA-215ENST00000637657 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
PCCA-215ENST00000637657 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
PCCA-215ENST00000637657 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
PCCA-215ENST00000637657 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
PCCA-215ENST00000637657 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
PCCA-215ENST00000637657 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
PCCA-215ENST00000637657 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
PCCA-215ENST00000637657 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
PCCA-215ENST00000637657 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
PCCA-215ENST00000637657 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms