RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
CLN6-221ENST00000637494 MT4P47944 62 aa6.54□□□□□ -1.36
CLN6-221ENST00000637494 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
CLN6-221ENST00000637494 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
CLN6-221ENST00000637494 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
CLN6-221ENST00000637494 K7ERS5 55 aa6.46□□□□□ -1.38
CLN6-221ENST00000637494 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
CLN6-221ENST00000637494 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
CLN6-221ENST00000637494 KRTAP5-4Q6L8H1 288 aa6.42□□□□□ -1.38
CLN6-221ENST00000637494 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
CLN6-221ENST00000637494 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
CLN6-221ENST00000637494 V9GYY9 64 aa6.35□□□□□ -1.39
CLN6-221ENST00000637494 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
CLN6-221ENST00000637494 PSPHP1O15172 72 aa6.27□□□□□ -1.41
CLN6-221ENST00000637494 Q1T7F1 81 aa6.22□□□□□ -1.41
CLN6-221ENST00000637494 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
CLN6-221ENST00000637494 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
CLN6-221ENST00000637494 KRTAP5-10Q6L8G5 202 aa6.14□□□□□ -1.43
CLN6-221ENST00000637494 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
CLN6-221ENST00000637494 AHNAK2Q8IVF2 5795 aa6.12□□□□□ -1.43
CLN6-221ENST00000637494 A6NED7 52 aa6.11□□□□□ -1.43
CLN6-221ENST00000637494 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
CLN6-221ENST00000637494 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
CLN6-221ENST00000637494 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
CLN6-221ENST00000637494 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
CLN6-221ENST00000637494 CDC42SE1Q9NRR8 79 aa6.05□□□□□ -1.44
CLN6-221ENST00000637494 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
CLN6-221ENST00000637494 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
CLN6-221ENST00000637494 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
CLN6-221ENST00000637494 KRTAP5-7Q6L8G8 165 aa5.93□□□□□ -1.46
CLN6-221ENST00000637494 ROMO1P60602 79 aa5.91□□□□□ -1.46
CLN6-221ENST00000637494 RPS28P62857 69 aaKnown RBP5.9□□□□□ -1.46
CLN6-221ENST00000637494 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
CLN6-221ENST00000637494 MT1AP04731 61 aa5.74□□□□□ -1.49
CLN6-221ENST00000637494 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
CLN6-221ENST00000637494 PCP4P48539 62 aa5.61□□□□□ -1.51
CLN6-221ENST00000637494 KRTAP5-2Q701N4 177 aa5.6□□□□□ -1.51
CLN6-221ENST00000637494 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
CLN6-221ENST00000637494 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
CLN6-221ENST00000637494 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
CLN6-221ENST00000637494 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
CLN6-221ENST00000637494 SVIPQ8NHG7 77 aa5.45□□□□□ -1.54
CLN6-221ENST00000637494 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
CLN6-221ENST00000637494 MT3P25713 68 aa5.3□□□□□ -1.56
CLN6-221ENST00000637494 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
CLN6-221ENST00000637494 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
CLN6-221ENST00000637494 BRK1Q8WUW1 75 aa5.12□□□□□ -1.59
CLN6-221ENST00000637494 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
CLN6-221ENST00000637494 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
CLN6-221ENST00000637494 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
CLN6-221ENST00000637494 AHNAKQ09666 5890 aaKnown RBP5.01□□□□□ -1.61
CLN6-221ENST00000637494 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
CLN6-221ENST00000637494 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
CLN6-221ENST00000637494 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
CLN6-221ENST00000637494 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
CLN6-221ENST00000637494 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
CLN6-221ENST00000637494 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
CLN6-221ENST00000637494 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
CLN6-221ENST00000637494 H3BS24 57 aa4.32□□□□□ -1.72
CLN6-221ENST00000637494 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
CLN6-221ENST00000637494 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
CLN6-221ENST00000637494 KRTAP4-12Q9BQ66 201 aa4.16□□□□□ -1.74
CLN6-221ENST00000637494 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
CLN6-221ENST00000637494 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
CLN6-221ENST00000637494 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
CLN6-221ENST00000637494 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
CLN6-221ENST00000637494 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
CLN6-221ENST00000637494 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
CLN6-221ENST00000637494 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
CLN6-221ENST00000637494 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
CLN6-221ENST00000637494 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
CLN6-221ENST00000637494 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
CLN6-221ENST00000637494 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
CLN6-221ENST00000637494 PRM1P04553 51 aa2.99□□□□□ -1.93
CLN6-221ENST00000637494 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
CLN6-221ENST00000637494 INE1O15225 51 aa2.53□□□□□ -2
CLN6-221ENST00000637494 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 239.7 ms