RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
GABRA1-216ENST00000637044 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
GABRA1-216ENST00000637044 INE1O15225 51 aa3.01□□□□□ -1.93
GABRA1-216ENST00000637044 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
GABRA1-216ENST00000637044 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
GABRA1-216ENST00000637044 SPRR2DP22532 72 aa2.96□□□□□ -1.94
GABRA1-216ENST00000637044 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
GABRA1-216ENST00000637044 MT1GP13640 62 aa2.93□□□□□ -1.94
GABRA1-216ENST00000637044 MT1EP04732 61 aa2.91□□□□□ -1.94
GABRA1-216ENST00000637044 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.94
GABRA1-216ENST00000637044 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
GABRA1-216ENST00000637044 MT1LQ93083 61 aa2.88□□□□□ -1.95
GABRA1-216ENST00000637044 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
GABRA1-216ENST00000637044 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
GABRA1-216ENST00000637044 KMT2DO14686 5537 aa2.79□□□□□ -1.96
GABRA1-216ENST00000637044 MT1MQ8N339 61 aa2.78□□□□□ -1.96
GABRA1-216ENST00000637044 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.97
GABRA1-216ENST00000637044 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
GABRA1-216ENST00000637044 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
GABRA1-216ENST00000637044 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
GABRA1-216ENST00000637044 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
GABRA1-216ENST00000637044 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
GABRA1-216ENST00000637044 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
GABRA1-216ENST00000637044 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
GABRA1-216ENST00000637044 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
GABRA1-216ENST00000637044 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
GABRA1-216ENST00000637044 LCE5AQ5TCM9 118 aa2.7□□□□□ -1.98
GABRA1-216ENST00000637044 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
GABRA1-216ENST00000637044 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
GABRA1-216ENST00000637044 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
GABRA1-216ENST00000637044 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
GABRA1-216ENST00000637044 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
GABRA1-216ENST00000637044 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
GABRA1-216ENST00000637044 NEBP20929 6669 aa2.61□□□□□ -1.99
GABRA1-216ENST00000637044 MT4P47944 62 aa2.61□□□□□ -1.99
GABRA1-216ENST00000637044 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
GABRA1-216ENST00000637044 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
GABRA1-216ENST00000637044 MT1AP04731 61 aa2.53□□□□□ -2
GABRA1-216ENST00000637044 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
GABRA1-216ENST00000637044 KRTAP4-9Q9BYQ8 210 aa2.5□□□□□ -2.01
GABRA1-216ENST00000637044 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
GABRA1-216ENST00000637044 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
GABRA1-216ENST00000637044 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
GABRA1-216ENST00000637044 KRTAP9-4Q9BYQ2 154 aa2.49□□□□□ -2.01
GABRA1-216ENST00000637044 MT3P25713 68 aa2.47□□□□□ -2.01
GABRA1-216ENST00000637044 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
GABRA1-216ENST00000637044 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
GABRA1-216ENST00000637044 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
GABRA1-216ENST00000637044 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.02
GABRA1-216ENST00000637044 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
GABRA1-216ENST00000637044 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
GABRA1-216ENST00000637044 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
GABRA1-216ENST00000637044 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
GABRA1-216ENST00000637044 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
GABRA1-216ENST00000637044 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
GABRA1-216ENST00000637044 PRM1P04553 51 aa2.17□□□□□ -2.06
GABRA1-216ENST00000637044 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.06
GABRA1-216ENST00000637044 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
GABRA1-216ENST00000637044 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
GABRA1-216ENST00000637044 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.07
GABRA1-216ENST00000637044 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
GABRA1-216ENST00000637044 LCE1EQ5T753 118 aa1.9□□□□□ -2.11
GABRA1-216ENST00000637044 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
GABRA1-216ENST00000637044 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
GABRA1-216ENST00000637044 KRTAP5-8O75690 187 aa1.84□□□□□ -2.12
GABRA1-216ENST00000637044 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
GABRA1-216ENST00000637044 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
GABRA1-216ENST00000637044 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
GABRA1-216ENST00000637044 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
GABRA1-216ENST00000637044 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
GABRA1-216ENST00000637044 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
GABRA1-216ENST00000637044 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
GABRA1-216ENST00000637044 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
GABRA1-216ENST00000637044 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
GABRA1-216ENST00000637044 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
GABRA1-216ENST00000637044 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
GABRA1-216ENST00000637044 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
GABRA1-216ENST00000637044 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 85.3 ms