RNA–Protein interactions for RNA: ENST00000636475.1

PCCA-213, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-213ENST00000636475 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
PCCA-213ENST00000636475 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
PCCA-213ENST00000636475 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
PCCA-213ENST00000636475 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
PCCA-213ENST00000636475 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
PCCA-213ENST00000636475 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
PCCA-213ENST00000636475 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
PCCA-213ENST00000636475 INE1O15225 51 aa3.67□□□□□ -1.82
PCCA-213ENST00000636475 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
PCCA-213ENST00000636475 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
PCCA-213ENST00000636475 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
PCCA-213ENST00000636475 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
PCCA-213ENST00000636475 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
PCCA-213ENST00000636475 KMT2DO14686 5537 aa3.57□□□□□ -1.84
PCCA-213ENST00000636475 NEBP20929 6669 aa3.54□□□□□ -1.84
PCCA-213ENST00000636475 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
PCCA-213ENST00000636475 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
PCCA-213ENST00000636475 MT1EP04732 61 aa3.52□□□□□ -1.85
PCCA-213ENST00000636475 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
PCCA-213ENST00000636475 MT1LQ93083 61 aa3.5□□□□□ -1.85
PCCA-213ENST00000636475 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
PCCA-213ENST00000636475 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
PCCA-213ENST00000636475 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
PCCA-213ENST00000636475 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
PCCA-213ENST00000636475 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
PCCA-213ENST00000636475 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
PCCA-213ENST00000636475 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
PCCA-213ENST00000636475 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
PCCA-213ENST00000636475 MT1GP13640 62 aa3.34□□□□□ -1.88
PCCA-213ENST00000636475 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
PCCA-213ENST00000636475 SPRR2EP22531 72 aa3.31□□□□□ -1.88
PCCA-213ENST00000636475 SPRR2BP35325 72 aa3.31□□□□□ -1.88
PCCA-213ENST00000636475 SPRR2AP35326 72 aa3.31□□□□□ -1.88
PCCA-213ENST00000636475 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
PCCA-213ENST00000636475 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
PCCA-213ENST00000636475 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
PCCA-213ENST00000636475 MT1MQ8N339 61 aa3.3□□□□□ -1.88
PCCA-213ENST00000636475 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
PCCA-213ENST00000636475 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
PCCA-213ENST00000636475 SPRR2DP22532 72 aa3.21□□□□□ -1.89
PCCA-213ENST00000636475 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
PCCA-213ENST00000636475 MT1AP04731 61 aa2.98□□□□□ -1.93
PCCA-213ENST00000636475 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
PCCA-213ENST00000636475 MT3P25713 68 aa2.95□□□□□ -1.94
PCCA-213ENST00000636475 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
PCCA-213ENST00000636475 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
PCCA-213ENST00000636475 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
PCCA-213ENST00000636475 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
PCCA-213ENST00000636475 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
PCCA-213ENST00000636475 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
PCCA-213ENST00000636475 MT4P47944 62 aa2.78□□□□□ -1.97
PCCA-213ENST00000636475 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
PCCA-213ENST00000636475 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
PCCA-213ENST00000636475 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
PCCA-213ENST00000636475 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
PCCA-213ENST00000636475 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
PCCA-213ENST00000636475 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.98
PCCA-213ENST00000636475 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
PCCA-213ENST00000636475 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
PCCA-213ENST00000636475 PRM1P04553 51 aa2.54□□□□□ -2
PCCA-213ENST00000636475 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
PCCA-213ENST00000636475 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
PCCA-213ENST00000636475 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
PCCA-213ENST00000636475 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
PCCA-213ENST00000636475 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
PCCA-213ENST00000636475 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
PCCA-213ENST00000636475 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
PCCA-213ENST00000636475 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
PCCA-213ENST00000636475 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
PCCA-213ENST00000636475 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
PCCA-213ENST00000636475 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
PCCA-213ENST00000636475 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
PCCA-213ENST00000636475 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
PCCA-213ENST00000636475 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
PCCA-213ENST00000636475 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.14
PCCA-213ENST00000636475 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
PCCA-213ENST00000636475 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
PCCA-213ENST00000636475 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 1443.3 ms