RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
SMARCA2-243ENST00000635590 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
SMARCA2-243ENST00000635590 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.93
SMARCA2-243ENST00000635590 KRTAP4-1Q9BYQ7 146 aa3.02□□□□□ -1.93
SMARCA2-243ENST00000635590 MT1HP80294 61 aa2.98□□□□□ -1.93
SMARCA2-243ENST00000635590 PLAC4Q8WY50 150 aa2.98□□□□□ -1.93
SMARCA2-243ENST00000635590 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
SMARCA2-243ENST00000635590 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
SMARCA2-243ENST00000635590 M0R2T5 61 aa2.91□□□□□ -1.94
SMARCA2-243ENST00000635590 USH2AO75445 5202 aa2.9□□□□□ -1.95
SMARCA2-243ENST00000635590 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
SMARCA2-243ENST00000635590 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
SMARCA2-243ENST00000635590 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
SMARCA2-243ENST00000635590 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
SMARCA2-243ENST00000635590 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.96
SMARCA2-243ENST00000635590 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
SMARCA2-243ENST00000635590 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SMARCA2-243ENST00000635590 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
SMARCA2-243ENST00000635590 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
SMARCA2-243ENST00000635590 TNP1P09430 55 aa2.81□□□□□ -1.96
SMARCA2-243ENST00000635590 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
SMARCA2-243ENST00000635590 MT2AP02795 61 aa2.72□□□□□ -1.97
SMARCA2-243ENST00000635590 NEBP20929 6669 aa2.71□□□□□ -1.98
SMARCA2-243ENST00000635590 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
SMARCA2-243ENST00000635590 SPRR2GQ9BYE4 73 aa2.7□□□□□ -1.98
SMARCA2-243ENST00000635590 MT1FP04733 61 aa2.68□□□□□ -1.98
SMARCA2-243ENST00000635590 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
SMARCA2-243ENST00000635590 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
SMARCA2-243ENST00000635590 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
SMARCA2-243ENST00000635590 MUC12Q9UKN1 5478 aa2.61□□□□□ -1.99
SMARCA2-243ENST00000635590 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
SMARCA2-243ENST00000635590 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
SMARCA2-243ENST00000635590 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
SMARCA2-243ENST00000635590 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
SMARCA2-243ENST00000635590 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
SMARCA2-243ENST00000635590 MT1BP07438 61 aa2.51□□□□□ -2.01
SMARCA2-243ENST00000635590 MT1XP80297 61 aa2.51□□□□□ -2.01
SMARCA2-243ENST00000635590 KMT2DO14686 5537 aa2.5□□□□□ -2.01
SMARCA2-243ENST00000635590 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
SMARCA2-243ENST00000635590 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
SMARCA2-243ENST00000635590 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
SMARCA2-243ENST00000635590 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
SMARCA2-243ENST00000635590 SPRR2EP22531 72 aa2.38□□□□□ -2.03
SMARCA2-243ENST00000635590 SPRR2BP35325 72 aa2.38□□□□□ -2.03
SMARCA2-243ENST00000635590 SPRR2AP35326 72 aa2.38□□□□□ -2.03
SMARCA2-243ENST00000635590 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
SMARCA2-243ENST00000635590 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
SMARCA2-243ENST00000635590 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
SMARCA2-243ENST00000635590 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
SMARCA2-243ENST00000635590 SPRR2DP22532 72 aa2.31□□□□□ -2.04
SMARCA2-243ENST00000635590 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
SMARCA2-243ENST00000635590 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
SMARCA2-243ENST00000635590 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
SMARCA2-243ENST00000635590 MT1LQ93083 61 aa2.19□□□□□ -2.06
SMARCA2-243ENST00000635590 MT1EP04732 61 aa2.18□□□□□ -2.06
SMARCA2-243ENST00000635590 LCE1CQ5T751 118 aa2.15□□□□□ -2.06
SMARCA2-243ENST00000635590 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.06
SMARCA2-243ENST00000635590 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
SMARCA2-243ENST00000635590 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
SMARCA2-243ENST00000635590 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
SMARCA2-243ENST00000635590 MT1GP13640 62 aa2.03□□□□□ -2.08
SMARCA2-243ENST00000635590 MT4P47944 62 aa2.03□□□□□ -2.08
SMARCA2-243ENST00000635590 KRTAP19-3Q7Z4W3 81 aa2.03□□□□□ -2.08
SMARCA2-243ENST00000635590 MT1MQ8N339 61 aa2.03□□□□□ -2.08
SMARCA2-243ENST00000635590 MT1AP04731 61 aa1.89□□□□□ -2.11
SMARCA2-243ENST00000635590 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
SMARCA2-243ENST00000635590 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
SMARCA2-243ENST00000635590 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
SMARCA2-243ENST00000635590 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
SMARCA2-243ENST00000635590 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
SMARCA2-243ENST00000635590 SYNE1Q8NF91 8797 aaKnown RBP1.77□□□□□ -2.13
SMARCA2-243ENST00000635590 PRM1P04553 51 aa1.75□□□□□ -2.13
SMARCA2-243ENST00000635590 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
SMARCA2-243ENST00000635590 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SMARCA2-243ENST00000635590 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
SMARCA2-243ENST00000635590 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
SMARCA2-243ENST00000635590 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
SMARCA2-243ENST00000635590 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 39.7 ms