RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
LINC00254-202ENST00000633813 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
LINC00254-202ENST00000633813 A0A0D9SG42 100 aa2.44□□□□□ -2.02
LINC00254-202ENST00000633813 LINC01554Q52M75 96 aa2.44□□□□□ -2.02
LINC00254-202ENST00000633813 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
LINC00254-202ENST00000633813 A6NN06 94 aa2.43□□□□□ -2.02
LINC00254-202ENST00000633813 K7ERS5 55 aa2.41□□□□□ -2.02
LINC00254-202ENST00000633813 KRTAP19-8Q3LI54 63 aa2.41□□□□□ -2.02
LINC00254-202ENST00000633813 KRTAP12-1P59990 96 aa2.4□□□□□ -2.03
LINC00254-202ENST00000633813 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
LINC00254-202ENST00000633813 PLAC4Q8WY50 150 aa2.38□□□□□ -2.03
LINC00254-202ENST00000633813 PRO0628Q9UI54 55 aa2.38□□□□□ -2.03
LINC00254-202ENST00000633813 MT1BP07438 61 aa2.36□□□□□ -2.03
LINC00254-202ENST00000633813 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
LINC00254-202ENST00000633813 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
LINC00254-202ENST00000633813 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
LINC00254-202ENST00000633813 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
LINC00254-202ENST00000633813 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
LINC00254-202ENST00000633813 ROMO1P60602 79 aa2.28□□□□□ -2.04
LINC00254-202ENST00000633813 MT1XP80297 61 aa2.28□□□□□ -2.04
LINC00254-202ENST00000633813 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
LINC00254-202ENST00000633813 KRTAP19-6Q3LI70 58 aa2.26□□□□□ -2.05
LINC00254-202ENST00000633813 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
LINC00254-202ENST00000633813 USH2AO75445 5202 aa2.24□□□□□ -2.05
LINC00254-202ENST00000633813 TNP1P09430 55 aa2.23□□□□□ -2.05
LINC00254-202ENST00000633813 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
LINC00254-202ENST00000633813 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
LINC00254-202ENST00000633813 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
LINC00254-202ENST00000633813 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
LINC00254-202ENST00000633813 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
LINC00254-202ENST00000633813 SSPOA2VEC9 5147 aa2.15□□□□□ -2.07
LINC00254-202ENST00000633813 FSIP2Q5CZC0 6907 aa2.13□□□□□ -2.07
LINC00254-202ENST00000633813 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
LINC00254-202ENST00000633813 KRTAP8-1Q8IUC2 63 aa2.1□□□□□ -2.07
LINC00254-202ENST00000633813 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
LINC00254-202ENST00000633813 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
LINC00254-202ENST00000633813 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
LINC00254-202ENST00000633813 KMT2DO14686 5537 aa2.03□□□□□ -2.08
LINC00254-202ENST00000633813 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
LINC00254-202ENST00000633813 MT1EP04732 61 aa2□□□□□ -2.09
LINC00254-202ENST00000633813 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
LINC00254-202ENST00000633813 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
LINC00254-202ENST00000633813 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
LINC00254-202ENST00000633813 MT1LQ93083 61 aa1.95□□□□□ -2.1
LINC00254-202ENST00000633813 KRTAP19-3Q7Z4W3 81 aa1.94□□□□□ -2.1
LINC00254-202ENST00000633813 MT1GP13640 62 aa1.93□□□□□ -2.1
LINC00254-202ENST00000633813 SPRR2EP22531 72 aa1.89□□□□□ -2.11
LINC00254-202ENST00000633813 SPRR2BP35325 72 aa1.89□□□□□ -2.11
LINC00254-202ENST00000633813 SPRR2AP35326 72 aa1.89□□□□□ -2.11
LINC00254-202ENST00000633813 MT1MQ8N339 61 aa1.88□□□□□ -2.11
LINC00254-202ENST00000633813 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
LINC00254-202ENST00000633813 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
LINC00254-202ENST00000633813 MDN1Q9NU22 5596 aa1.84□□□□□ -2.12
LINC00254-202ENST00000633813 SPRR2DP22532 72 aa1.83□□□□□ -2.12
LINC00254-202ENST00000633813 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
LINC00254-202ENST00000633813 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
LINC00254-202ENST00000633813 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
LINC00254-202ENST00000633813 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
LINC00254-202ENST00000633813 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
LINC00254-202ENST00000633813 NEBP20929 6669 aa1.69□□□□□ -2.14
LINC00254-202ENST00000633813 MT1AP04731 61 aa1.67□□□□□ -2.14
LINC00254-202ENST00000633813 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
LINC00254-202ENST00000633813 MT4P47944 62 aa1.58□□□□□ -2.16
LINC00254-202ENST00000633813 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
LINC00254-202ENST00000633813 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
LINC00254-202ENST00000633813 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
LINC00254-202ENST00000633813 INE1O15225 51 aa1.43□□□□□ -2.18
LINC00254-202ENST00000633813 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
LINC00254-202ENST00000633813 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
LINC00254-202ENST00000633813 PRM1P04553 51 aa1.17□□□□□ -2.22
LINC00254-202ENST00000633813 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
LINC00254-202ENST00000633813 GPR98Q8WXG9 6306 aa1.13□□□□□ -2.23
LINC00254-202ENST00000633813 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
LINC00254-202ENST00000633813 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
LINC00254-202ENST00000633813 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
LINC00254-202ENST00000633813 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
LINC00254-202ENST00000633813 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 59.4 ms