RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 KRTAP19-6Q3LI70 58 aa6.17□□□□□ -1.42
CCNL1-226ENST00000631619 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
CCNL1-226ENST00000631619 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
CCNL1-226ENST00000631619 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
CCNL1-226ENST00000631619 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
CCNL1-226ENST00000631619 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
CCNL1-226ENST00000631619 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
CCNL1-226ENST00000631619 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
CCNL1-226ENST00000631619 MUC12Q9UKN1 5478 aa5.84□□□□□ -1.48
CCNL1-226ENST00000631619 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
CCNL1-226ENST00000631619 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.48
CCNL1-226ENST00000631619 MT1MQ8N339 61 aa5.77□□□□□ -1.48
CCNL1-226ENST00000631619 MT1GP13640 62 aa5.76□□□□□ -1.49
CCNL1-226ENST00000631619 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
CCNL1-226ENST00000631619 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
CCNL1-226ENST00000631619 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.51
CCNL1-226ENST00000631619 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
CCNL1-226ENST00000631619 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
CCNL1-226ENST00000631619 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
CCNL1-226ENST00000631619 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
CCNL1-226ENST00000631619 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
CCNL1-226ENST00000631619 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
CCNL1-226ENST00000631619 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
CCNL1-226ENST00000631619 KRTAP4-12Q9BQ66 201 aa5.31□□□□□ -1.56
CCNL1-226ENST00000631619 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
CCNL1-226ENST00000631619 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
CCNL1-226ENST00000631619 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
CCNL1-226ENST00000631619 MT1AP04731 61 aa5.22□□□□□ -1.57
CCNL1-226ENST00000631619 SPRR2EP22531 72 aa5.22□□□□□ -1.57
CCNL1-226ENST00000631619 SPRR2BP35325 72 aa5.22□□□□□ -1.57
CCNL1-226ENST00000631619 SPRR2AP35326 72 aa5.22□□□□□ -1.57
CCNL1-226ENST00000631619 KRTAP6-3Q3LI67 103 aa5.19□□□□□ -1.58
CCNL1-226ENST00000631619 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
CCNL1-226ENST00000631619 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
CCNL1-226ENST00000631619 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.59
CCNL1-226ENST00000631619 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
CCNL1-226ENST00000631619 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.59
CCNL1-226ENST00000631619 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
CCNL1-226ENST00000631619 PRM1P04553 51 aa5.05□□□□□ -1.6
CCNL1-226ENST00000631619 KRTAP9-7A8MTY7 169 aa5.04□□□□□ -1.6
CCNL1-226ENST00000631619 SPRR2DP22532 72 aa5□□□□□ -1.61
CCNL1-226ENST00000631619 NEBP20929 6669 aa4.97□□□□□ -1.61
CCNL1-226ENST00000631619 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
CCNL1-226ENST00000631619 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
CCNL1-226ENST00000631619 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
CCNL1-226ENST00000631619 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
CCNL1-226ENST00000631619 MT3P25713 68 aa4.64□□□□□ -1.67
CCNL1-226ENST00000631619 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
CCNL1-226ENST00000631619 KRTAP4-11Q9BYQ6 195 aa4.61□□□□□ -1.67
CCNL1-226ENST00000631619 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
CCNL1-226ENST00000631619 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
CCNL1-226ENST00000631619 MT4P47944 62 aa4.44□□□□□ -1.7
CCNL1-226ENST00000631619 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.7
CCNL1-226ENST00000631619 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.72
CCNL1-226ENST00000631619 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
CCNL1-226ENST00000631619 KRTAP5-2Q701N4 177 aa4.2□□□□□ -1.74
CCNL1-226ENST00000631619 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
CCNL1-226ENST00000631619 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
CCNL1-226ENST00000631619 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
CCNL1-226ENST00000631619 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
CCNL1-226ENST00000631619 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
CCNL1-226ENST00000631619 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
CCNL1-226ENST00000631619 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
CCNL1-226ENST00000631619 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
CCNL1-226ENST00000631619 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
CCNL1-226ENST00000631619 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
CCNL1-226ENST00000631619 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
CCNL1-226ENST00000631619 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
CCNL1-226ENST00000631619 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
CCNL1-226ENST00000631619 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
CCNL1-226ENST00000631619 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
CCNL1-226ENST00000631619 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
CCNL1-226ENST00000631619 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
CCNL1-226ENST00000631619 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CCNL1-226ENST00000631619 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CCNL1-226ENST00000631619 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
CCNL1-226ENST00000631619 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
CCNL1-226ENST00000631619 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms