RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247		A0A0D9SG42	100 aa		3.86	□□□□□ -1.79
UBE3A-223	ENST00000631247	MT1E	P04732	61 aa		3.86	□□□□□ -1.79
UBE3A-223	ENST00000631247	SERP1	Q9Y6X1	66 aa		3.85	□□□□□ -1.79
UBE3A-223	ENST00000631247	COA5	Q86WW8	74 aa		3.83	□□□□□ -1.8
UBE3A-223	ENST00000631247	SPINT4	Q6UDR6	99 aa		3.82	□□□□□ -1.8
UBE3A-223	ENST00000631247	SERP2	Q8N6R1	65 aa		3.82	□□□□□ -1.8
UBE3A-223	ENST00000631247	HMCN1	Q96RW7	5635 aa		3.82	□□□□□ -1.8
UBE3A-223	ENST00000631247	CYSTM1	Q9H1C7	97 aa		3.81	□□□□□ -1.8
UBE3A-223	ENST00000631247	SPATA8	Q6RVD6	105 aa		3.79	□□□□□ -1.8
UBE3A-223	ENST00000631247	PP632	Q6XCG6	107 aa		3.78	□□□□□ -1.8
UBE3A-223	ENST00000631247		A0A1B0GU33	70 aa		3.77	□□□□□ -1.81
UBE3A-223	ENST00000631247	KRTAP19-5	Q3LI72	72 aa		3.76	□□□□□ -1.81
UBE3A-223	ENST00000631247	MT1G	P13640	62 aa		3.75	□□□□□ -1.81
UBE3A-223	ENST00000631247		V9GYY9	64 aa		3.75	□□□□□ -1.81
UBE3A-223	ENST00000631247		A8MU10	97 aa		3.74	□□□□□ -1.81
UBE3A-223	ENST00000631247	SMIM26	A0A096LP01	95 aa		3.73	□□□□□ -1.81
UBE3A-223	ENST00000631247	AHNAK2	Q8IVF2	5795 aa		3.72	□□□□□ -1.81
UBE3A-223	ENST00000631247	KRTAP12-1	P59990	96 aa		3.72	□□□□□ -1.81
UBE3A-223	ENST00000631247	LCE3C	Q5T5A8	94 aa		3.72	□□□□□ -1.81
UBE3A-223	ENST00000631247	MT4	P47944	62 aa		3.7	□□□□□ -1.82
UBE3A-223	ENST00000631247	MT1M	Q8N339	61 aa		3.69	□□□□□ -1.82
UBE3A-223	ENST00000631247		A0A1B0GU69	56 aa		3.67	□□□□□ -1.82
UBE3A-223	ENST00000631247	MT1L	Q93083	61 aa		3.66	□□□□□ -1.82
UBE3A-223	ENST00000631247	COX7C	P15954	63 aa		3.65	□□□□□ -1.83
UBE3A-223	ENST00000631247	TNP1	P09430	55 aa		3.64	□□□□□ -1.83
UBE3A-223	ENST00000631247	PSPHP1	O15172	72 aa		3.63	□□□□□ -1.83
UBE3A-223	ENST00000631247	LCE3A	Q5TA76	89 aa		3.63	□□□□□ -1.83
UBE3A-223	ENST00000631247	C10orf95	Q9H7T3	257 aa		3.63	□□□□□ -1.83
UBE3A-223	ENST00000631247	OBSCN	Q5VST9	7968 aa		3.62	□□□□□ -1.83
UBE3A-223	ENST00000631247		H7BZZ5	65 aa		3.62	□□□□□ -1.83
UBE3A-223	ENST00000631247	KRTAP4-3	Q9BYR4	195 aa		3.6	□□□□□ -1.83
UBE3A-223	ENST00000631247	PRR15L	Q9BU68	103 aa		3.54	□□□□□ -1.84
UBE3A-223	ENST00000631247	PRO0628	Q9UI54	55 aa		3.53	□□□□□ -1.84
UBE3A-223	ENST00000631247	KRTAP5-10	Q6L8G5	202 aa		3.51	□□□□□ -1.85
UBE3A-223	ENST00000631247	KRTAP12-3	P60328	96 aa		3.5	□□□□□ -1.85
UBE3A-223	ENST00000631247	ANAPC13	Q9BS18	74 aa		3.48	□□□□□ -1.85
UBE3A-223	ENST00000631247	LUZP6	Q538Z0	58 aa		3.47	□□□□□ -1.85
UBE3A-223	ENST00000631247	ATP5E	P56381	51 aa	Predicted RBP	3.43	□□□□□ -1.86
UBE3A-223	ENST00000631247	KRTAP20-2	Q3LI61	65 aa		3.4	□□□□□ -1.87
UBE3A-223	ENST00000631247	KRTAP5-7	Q6L8G8	165 aa		3.4	□□□□□ -1.87
UBE3A-223	ENST00000631247	UQCR11	O14957	56 aa		3.39	□□□□□ -1.87
UBE3A-223	ENST00000631247	LCE3E	Q5T5B0	92 aa		3.39	□□□□□ -1.87
UBE3A-223	ENST00000631247	LINC01558	Q9Y6Z2	57 aa		3.39	□□□□□ -1.87
UBE3A-223	ENST00000631247	KRTAP12-4	P60329	112 aa		3.38	□□□□□ -1.87
UBE3A-223	ENST00000631247	SPRR5	A0A1B0GTR4	108 aa		3.37	□□□□□ -1.87
UBE3A-223	ENST00000631247	CCDC179	H3BU77	68 aa		3.37	□□□□□ -1.87
UBE3A-223	ENST00000631247	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.37	□□□□□ -1.87
UBE3A-223	ENST00000631247	KRTAP25-1	Q3LHN0	102 aa		3.35	□□□□□ -1.87
UBE3A-223	ENST00000631247		K7ERS5	55 aa		3.32	□□□□□ -1.88
UBE3A-223	ENST00000631247	SYNE1	Q8NF91	8797 aa	Known RBP	3.29	□□□□□ -1.88
UBE3A-223	ENST00000631247	MIR22HG	Q0VDD5	57 aa		3.29	□□□□□ -1.88
UBE3A-223	ENST00000631247	TMEM258	P61165	79 aa		3.26	□□□□□ -1.89
UBE3A-223	ENST00000631247	KRTAP5-2	Q701N4	177 aa		3.23	□□□□□ -1.89
UBE3A-223	ENST00000631247	AHNAK	Q09666	5890 aa	Known RBP	3.13	□□□□□ -1.91
UBE3A-223	ENST00000631247		A6NED7	52 aa		3.13	□□□□□ -1.91
UBE3A-223	ENST00000631247	MT1A	P04731	61 aa		3.11	□□□□□ -1.91
UBE3A-223	ENST00000631247	KRTAP6-1	Q3LI64	71 aa		3.1	□□□□□ -1.91
UBE3A-223	ENST00000631247	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.1	□□□□□ -1.91
UBE3A-223	ENST00000631247	CDC42SE1	Q9NRR8	79 aa		3.09	□□□□□ -1.91
UBE3A-223	ENST00000631247	MUC5AC	P98088	5654 aa		3.09	□□□□□ -1.91
UBE3A-223	ENST00000631247	RPS28	P62857	69 aa	Known RBP	3.06	□□□□□ -1.92
UBE3A-223	ENST00000631247		Q1T7F1	81 aa		3.06	□□□□□ -1.92
UBE3A-223	ENST00000631247	KRTAP5-8	O75690	187 aa		3.01	□□□□□ -1.93
UBE3A-223	ENST00000631247	ROMO1	P60602	79 aa		3.01	□□□□□ -1.93
UBE3A-223	ENST00000631247	KRTAP6-2	Q3LI66	62 aa		3.01	□□□□□ -1.93
UBE3A-223	ENST00000631247	LCE1C	Q5T751	118 aa		2.96	□□□□□ -1.94
UBE3A-223	ENST00000631247	LCE1B	Q5T7P3	118 aa		2.96	□□□□□ -1.94
UBE3A-223	ENST00000631247	LCE3D	Q9BYE3	92 aa		2.92	□□□□□ -1.94
UBE3A-223	ENST00000631247	PMAIP1	Q13794	54 aa		2.83	□□□□□ -1.96
UBE3A-223	ENST00000631247	KTN1-AS1	Q86SY8	53 aa		2.56	□□□□□ -2
UBE3A-223	ENST00000631247	MUC19	Q7Z5P9	8384 aa		2.46	□□□□□ -2.02
UBE3A-223	ENST00000631247	BRK1	Q8WUW1	75 aa		2.46	□□□□□ -2.02
UBE3A-223	ENST00000631247	KRTAP21-2	Q3LI59	83 aa		2.11	□□□□□ -2.07
UBE3A-223	ENST00000631247	PHGR1	C9JFL3	82 aa		2.09	□□□□□ -2.07
UBE3A-223	ENST00000631247	INE1	O15225	51 aa		1.98	□□□□□ -2.09
UBE3A-223	ENST00000631247	KRTAP21-1	Q3LI58	79 aa		1.59	□□□□□ -2.15
UBE3A-223	ENST00000631247	PRM1	P04553	51 aa		1.53	□□□□□ -2.16
UBE3A-223	ENST00000631247	MUC16	Q8WXI7	14507 aa		1.26	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 89.2 ms