RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
SPTAN1-218ENST00000629137 SMIM26A0A096LP01 95 aa3.64□□□□□ -1.83
SPTAN1-218ENST00000629137 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
SPTAN1-218ENST00000629137 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
SPTAN1-218ENST00000629137 NEBP20929 6669 aa3.62□□□□□ -1.83
SPTAN1-218ENST00000629137 UQCR11O14957 56 aa3.57□□□□□ -1.84
SPTAN1-218ENST00000629137 SPRR2EP22531 72 aa3.55□□□□□ -1.84
SPTAN1-218ENST00000629137 SPRR2BP35325 72 aa3.55□□□□□ -1.84
SPTAN1-218ENST00000629137 SPRR2AP35326 72 aa3.55□□□□□ -1.84
SPTAN1-218ENST00000629137 Q1T7F1 81 aa3.55□□□□□ -1.84
SPTAN1-218ENST00000629137 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SPTAN1-218ENST00000629137 PSPHP1O15172 72 aa3.54□□□□□ -1.84
SPTAN1-218ENST00000629137 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
SPTAN1-218ENST00000629137 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
SPTAN1-218ENST00000629137 V9GYY9 64 aa3.52□□□□□ -1.85
SPTAN1-218ENST00000629137 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
SPTAN1-218ENST00000629137 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
SPTAN1-218ENST00000629137 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
SPTAN1-218ENST00000629137 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
SPTAN1-218ENST00000629137 MT1EP04732 61 aa3.43□□□□□ -1.86
SPTAN1-218ENST00000629137 TNP1P09430 55 aa3.43□□□□□ -1.86
SPTAN1-218ENST00000629137 SPRR2DP22532 72 aa3.43□□□□□ -1.86
SPTAN1-218ENST00000629137 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
SPTAN1-218ENST00000629137 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
SPTAN1-218ENST00000629137 A6NED7 52 aa3.41□□□□□ -1.86
SPTAN1-218ENST00000629137 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
SPTAN1-218ENST00000629137 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
SPTAN1-218ENST00000629137 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
SPTAN1-218ENST00000629137 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
SPTAN1-218ENST00000629137 K7ERS5 55 aa3.37□□□□□ -1.87
SPTAN1-218ENST00000629137 KRTAP19-3Q7Z4W3 81 aa3.36□□□□□ -1.87
SPTAN1-218ENST00000629137 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
SPTAN1-218ENST00000629137 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
SPTAN1-218ENST00000629137 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
SPTAN1-218ENST00000629137 MT1LQ93083 61 aa3.3□□□□□ -1.88
SPTAN1-218ENST00000629137 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
SPTAN1-218ENST00000629137 MT1GP13640 62 aa3.28□□□□□ -1.88
SPTAN1-218ENST00000629137 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
SPTAN1-218ENST00000629137 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
SPTAN1-218ENST00000629137 MT1MQ8N339 61 aa3.26□□□□□ -1.89
SPTAN1-218ENST00000629137 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
SPTAN1-218ENST00000629137 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
SPTAN1-218ENST00000629137 ROMO1P60602 79 aa3.21□□□□□ -1.9
SPTAN1-218ENST00000629137 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
SPTAN1-218ENST00000629137 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
SPTAN1-218ENST00000629137 MT4P47944 62 aa3.01□□□□□ -1.93
SPTAN1-218ENST00000629137 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
SPTAN1-218ENST00000629137 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
SPTAN1-218ENST00000629137 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
SPTAN1-218ENST00000629137 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
SPTAN1-218ENST00000629137 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
SPTAN1-218ENST00000629137 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
SPTAN1-218ENST00000629137 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
SPTAN1-218ENST00000629137 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
SPTAN1-218ENST00000629137 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
SPTAN1-218ENST00000629137 MT1AP04731 61 aa2.8□□□□□ -1.96
SPTAN1-218ENST00000629137 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
SPTAN1-218ENST00000629137 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
SPTAN1-218ENST00000629137 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
SPTAN1-218ENST00000629137 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
SPTAN1-218ENST00000629137 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
SPTAN1-218ENST00000629137 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
SPTAN1-218ENST00000629137 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
SPTAN1-218ENST00000629137 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
SPTAN1-218ENST00000629137 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
SPTAN1-218ENST00000629137 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
SPTAN1-218ENST00000629137 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
SPTAN1-218ENST00000629137 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
SPTAN1-218ENST00000629137 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-218ENST00000629137 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.05
SPTAN1-218ENST00000629137 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
SPTAN1-218ENST00000629137 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
SPTAN1-218ENST00000629137 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SPTAN1-218ENST00000629137 PRM1P04553 51 aa1.67□□□□□ -2.14
SPTAN1-218ENST00000629137 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
SPTAN1-218ENST00000629137 INE1O15225 51 aa1.58□□□□□ -2.16
SPTAN1-218ENST00000629137 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
SPTAN1-218ENST00000629137 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 161.2 ms