RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 K7ERS5 55 aa5.58□□□□□ -1.52
CHRNA4-211ENST00000628606 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
CHRNA4-211ENST00000628606 V9GYY9 64 aa5.56□□□□□ -1.52
CHRNA4-211ENST00000628606 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
CHRNA4-211ENST00000628606 PSPHP1O15172 72 aa5.49□□□□□ -1.53
CHRNA4-211ENST00000628606 KRTAP25-1Q3LHN0 102 aa5.49□□□□□ -1.53
CHRNA4-211ENST00000628606 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
CHRNA4-211ENST00000628606 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
CHRNA4-211ENST00000628606 Q1T7F1 81 aa5.46□□□□□ -1.54
CHRNA4-211ENST00000628606 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
CHRNA4-211ENST00000628606 MT4P47944 62 aa5.42□□□□□ -1.54
CHRNA4-211ENST00000628606 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
CHRNA4-211ENST00000628606 A6NED7 52 aa5.34□□□□□ -1.55
CHRNA4-211ENST00000628606 KRTAP5-4Q6L8H1 288 aa5.33□□□□□ -1.56
CHRNA4-211ENST00000628606 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
CHRNA4-211ENST00000628606 PCP4P48539 62 aa5.3□□□□□ -1.56
CHRNA4-211ENST00000628606 GPR98Q8WXG9 6306 aa5.3□□□□□ -1.56
CHRNA4-211ENST00000628606 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
CHRNA4-211ENST00000628606 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
CHRNA4-211ENST00000628606 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
CHRNA4-211ENST00000628606 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
CHRNA4-211ENST00000628606 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
CHRNA4-211ENST00000628606 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
CHRNA4-211ENST00000628606 ROMO1P60602 79 aa5.12□□□□□ -1.59
CHRNA4-211ENST00000628606 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
CHRNA4-211ENST00000628606 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
CHRNA4-211ENST00000628606 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
CHRNA4-211ENST00000628606 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
CHRNA4-211ENST00000628606 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
CHRNA4-211ENST00000628606 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
CHRNA4-211ENST00000628606 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
CHRNA4-211ENST00000628606 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
CHRNA4-211ENST00000628606 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
CHRNA4-211ENST00000628606 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
CHRNA4-211ENST00000628606 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
CHRNA4-211ENST00000628606 MT1AP04731 61 aa4.82□□□□□ -1.64
CHRNA4-211ENST00000628606 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
CHRNA4-211ENST00000628606 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
CHRNA4-211ENST00000628606 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
CHRNA4-211ENST00000628606 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
CHRNA4-211ENST00000628606 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
CHRNA4-211ENST00000628606 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
CHRNA4-211ENST00000628606 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
CHRNA4-211ENST00000628606 MT3P25713 68 aa4.44□□□□□ -1.7
CHRNA4-211ENST00000628606 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
CHRNA4-211ENST00000628606 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
CHRNA4-211ENST00000628606 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
CHRNA4-211ENST00000628606 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
CHRNA4-211ENST00000628606 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.74
CHRNA4-211ENST00000628606 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
CHRNA4-211ENST00000628606 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
CHRNA4-211ENST00000628606 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
CHRNA4-211ENST00000628606 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.74
CHRNA4-211ENST00000628606 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
CHRNA4-211ENST00000628606 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CHRNA4-211ENST00000628606 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
CHRNA4-211ENST00000628606 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
CHRNA4-211ENST00000628606 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
CHRNA4-211ENST00000628606 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
CHRNA4-211ENST00000628606 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
CHRNA4-211ENST00000628606 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
CHRNA4-211ENST00000628606 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
CHRNA4-211ENST00000628606 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
CHRNA4-211ENST00000628606 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
CHRNA4-211ENST00000628606 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
CHRNA4-211ENST00000628606 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CHRNA4-211ENST00000628606 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
CHRNA4-211ENST00000628606 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
CHRNA4-211ENST00000628606 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
CHRNA4-211ENST00000628606 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
CHRNA4-211ENST00000628606 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CHRNA4-211ENST00000628606 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
CHRNA4-211ENST00000628606 PRM1P04553 51 aa2.6□□□□□ -1.99
CHRNA4-211ENST00000628606 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
CHRNA4-211ENST00000628606 INE1O15225 51 aa2.4□□□□□ -2.03
CHRNA4-211ENST00000628606 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
CHRNA4-211ENST00000628606 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
CHRNA4-211ENST00000628606 H3BS24 57 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 53.1 ms