RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 COA5Q86WW8 74 aa2.97□□□□□ -1.93
TCF4-260ENST00000627685 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
TCF4-260ENST00000627685 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
TCF4-260ENST00000627685 COX7CP15954 63 aa2.95□□□□□ -1.94
TCF4-260ENST00000627685 SPRR2DP22532 72 aa2.94□□□□□ -1.94
TCF4-260ENST00000627685 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
TCF4-260ENST00000627685 KRTAP12-1P59990 96 aa2.89□□□□□ -1.95
TCF4-260ENST00000627685 CAMK2N1Q7Z7J9 78 aa2.89□□□□□ -1.95
TCF4-260ENST00000627685 MT1EP04732 61 aa2.87□□□□□ -1.95
TCF4-260ENST00000627685 SEC61GP60059 68 aa2.87□□□□□ -1.95
TCF4-260ENST00000627685 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
TCF4-260ENST00000627685 ANAPC13Q9BS18 74 aa2.87□□□□□ -1.95
TCF4-260ENST00000627685 SERP1Q9Y6X1 66 aa2.87□□□□□ -1.95
TCF4-260ENST00000627685 A0A1B0GU33 70 aa2.83□□□□□ -1.96
TCF4-260ENST00000627685 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
TCF4-260ENST00000627685 A0A0D9SG42 100 aa2.82□□□□□ -1.96
TCF4-260ENST00000627685 DSTQ03001 7570 aaKnown RBP2.82□□□□□ -1.96
TCF4-260ENST00000627685 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
TCF4-260ENST00000627685 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
TCF4-260ENST00000627685 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
TCF4-260ENST00000627685 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
TCF4-260ENST00000627685 SMIM26A0A096LP01 95 aa2.77□□□□□ -1.97
TCF4-260ENST00000627685 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
TCF4-260ENST00000627685 A0A1B0GU69 56 aa2.76□□□□□ -1.97
TCF4-260ENST00000627685 MT1GP13640 62 aa2.75□□□□□ -1.97
TCF4-260ENST00000627685 ATP5EP56381 51 aaPredicted RBP2.74□□□□□ -1.97
TCF4-260ENST00000627685 TMEM258P61165 79 aa2.74□□□□□ -1.97
TCF4-260ENST00000627685 MT1LQ93083 61 aa2.74□□□□□ -1.97
TCF4-260ENST00000627685 MT1MQ8N339 61 aa2.73□□□□□ -1.97
TCF4-260ENST00000627685 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
TCF4-260ENST00000627685 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
TCF4-260ENST00000627685 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
TCF4-260ENST00000627685 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
TCF4-260ENST00000627685 TNP1P09430 55 aa2.68□□□□□ -1.98
TCF4-260ENST00000627685 PRR15LQ9BU68 103 aa2.68□□□□□ -1.98
TCF4-260ENST00000627685 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
TCF4-260ENST00000627685 RPS28P62857 69 aaKnown RBP2.67□□□□□ -1.98
TCF4-260ENST00000627685 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
TCF4-260ENST00000627685 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
TCF4-260ENST00000627685 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
TCF4-260ENST00000627685 UQCR11O14957 56 aa2.6□□□□□ -1.99
TCF4-260ENST00000627685 V9GYY9 64 aa2.6□□□□□ -1.99
TCF4-260ENST00000627685 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
TCF4-260ENST00000627685 KRTAP12-3P60328 96 aa2.58□□□□□ -2
TCF4-260ENST00000627685 MT4P47944 62 aa2.55□□□□□ -2
TCF4-260ENST00000627685 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
TCF4-260ENST00000627685 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
TCF4-260ENST00000627685 Q1T7F1 81 aa2.52□□□□□ -2.01
TCF4-260ENST00000627685 PSPHP1O15172 72 aa2.49□□□□□ -2.01
TCF4-260ENST00000627685 K7ERS5 55 aa2.48□□□□□ -2.01
TCF4-260ENST00000627685 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
TCF4-260ENST00000627685 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
TCF4-260ENST00000627685 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
TCF4-260ENST00000627685 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
TCF4-260ENST00000627685 PRO0628Q9UI54 55 aa2.43□□□□□ -2.02
TCF4-260ENST00000627685 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
TCF4-260ENST00000627685 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
TCF4-260ENST00000627685 A6NED7 52 aa2.39□□□□□ -2.03
TCF4-260ENST00000627685 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
TCF4-260ENST00000627685 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
TCF4-260ENST00000627685 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
TCF4-260ENST00000627685 MT1AP04731 61 aa2.31□□□□□ -2.04
TCF4-260ENST00000627685 ROMO1P60602 79 aa2.31□□□□□ -2.04
TCF4-260ENST00000627685 PMAIP1Q13794 54 aa2.3□□□□□ -2.04
TCF4-260ENST00000627685 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
TCF4-260ENST00000627685 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
TCF4-260ENST00000627685 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
TCF4-260ENST00000627685 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
TCF4-260ENST00000627685 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
TCF4-260ENST00000627685 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
TCF4-260ENST00000627685 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
TCF4-260ENST00000627685 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
TCF4-260ENST00000627685 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
TCF4-260ENST00000627685 INE1O15225 51 aa1.55□□□□□ -2.16
TCF4-260ENST00000627685 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
TCF4-260ENST00000627685 PRM1P04553 51 aa1.21□□□□□ -2.22
TCF4-260ENST00000627685 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
TCF4-260ENST00000627685 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 251.7 ms