RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 ATP5EP56381 51 aaPredicted RBP8.9□□□□□ -0.98
TCF4-259ENST00000627568 CCDC179H3BU77 68 aa8.88□□□□□ -0.99
TCF4-259ENST00000627568 KRTAP4-3Q9BYR4 195 aa8.88□□□□□ -0.99
TCF4-259ENST00000627568 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
TCF4-259ENST00000627568 KRTAP5-4Q6L8H1 288 aa8.78□□□□□ -1
TCF4-259ENST00000627568 KRTAP12-3P60328 96 aa8.73□□□□□ -1.01
TCF4-259ENST00000627568 UQCR11O14957 56 aa8.67□□□□□ -1.02
TCF4-259ENST00000627568 AHNAK2Q8IVF2 5795 aa8.66□□□□□ -1.02
TCF4-259ENST00000627568 KRTAP4-6Q9BYQ5 205 aa8.64□□□□□ -1.03
TCF4-259ENST00000627568 KRTAP4-7Q9BYR0 210 aa8.62□□□□□ -1.03
TCF4-259ENST00000627568 PCP4P48539 62 aa8.61□□□□□ -1.03
TCF4-259ENST00000627568 TMEM258P61165 79 aa8.56□□□□□ -1.04
TCF4-259ENST00000627568 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
TCF4-259ENST00000627568 KRTAP5-10Q6L8G5 202 aa8.48□□□□□ -1.05
TCF4-259ENST00000627568 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
TCF4-259ENST00000627568 K7ERS5 55 aa8.39□□□□□ -1.07
TCF4-259ENST00000627568 KRTAP5-5Q701N2 237 aaPredicted RBP8.35□□□□□ -1.07
TCF4-259ENST00000627568 KRTAP20-2Q3LI61 65 aa8.32□□□□□ -1.08
TCF4-259ENST00000627568 SPRR5A0A1B0GTR4 108 aa8.27□□□□□ -1.09
TCF4-259ENST00000627568 KRTAP12-4P60329 112 aa8.26□□□□□ -1.09
TCF4-259ENST00000627568 KRTAP5-3Q6L8H2 238 aa8.26□□□□□ -1.09
TCF4-259ENST00000627568 KRTAP19-4Q3LI73 84 aa8.23□□□□□ -1.09
TCF4-259ENST00000627568 LOC100996750A0A140TA64 210 aa8.19□□□□□ -1.1
TCF4-259ENST00000627568 KRTAP5-7Q6L8G8 165 aa8.19□□□□□ -1.1
TCF4-259ENST00000627568 V9GYY9 64 aa8.17□□□□□ -1.1
TCF4-259ENST00000627568 PSPHP1O15172 72 aa8.16□□□□□ -1.1
TCF4-259ENST00000627568 KRTAP23-1A1A580 65 aa8.12□□□□□ -1.11
TCF4-259ENST00000627568 RPS28P62857 69 aaKnown RBP8.1□□□□□ -1.11
TCF4-259ENST00000627568 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
TCF4-259ENST00000627568 Q1T7F1 81 aa8.04□□□□□ -1.12
TCF4-259ENST00000627568 SYNE1Q8NF91 8797 aaKnown RBP8.02□□□□□ -1.13
TCF4-259ENST00000627568 LCE3CQ5T5A8 94 aa8□□□□□ -1.13
TCF4-259ENST00000627568 A6NED7 52 aa7.9□□□□□ -1.14
TCF4-259ENST00000627568 CDC42SE1Q9NRR8 79 aa7.88□□□□□ -1.15
TCF4-259ENST00000627568 MT1AP04731 61 aa7.76□□□□□ -1.17
TCF4-259ENST00000627568 ROMO1P60602 79 aa7.71□□□□□ -1.18
TCF4-259ENST00000627568 KRTAP6-1Q3LI64 71 aa7.7□□□□□ -1.18
TCF4-259ENST00000627568 KRTAP5-2Q701N4 177 aa7.66□□□□□ -1.18
TCF4-259ENST00000627568 KRTAP4-11Q9BYQ6 195 aa7.65□□□□□ -1.18
TCF4-259ENST00000627568 KRTAP9-6A8MVA2 160 aa7.5□□□□□ -1.21
TCF4-259ENST00000627568 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
TCF4-259ENST00000627568 KRTAP6-2Q3LI66 62 aa7.41□□□□□ -1.22
TCF4-259ENST00000627568 KRTAP5-8O75690 187 aa7.37□□□□□ -1.23
TCF4-259ENST00000627568 OBSCNQ5VST9 7968 aa7.26□□□□□ -1.25
TCF4-259ENST00000627568 BRK1Q8WUW1 75 aa7.19□□□□□ -1.26
TCF4-259ENST00000627568 MUC5BQ9HC84 5762 aaPredicted RBP7.17□□□□□ -1.26
TCF4-259ENST00000627568 AHNAKQ09666 5890 aaKnown RBP7.17□□□□□ -1.26
TCF4-259ENST00000627568 MUC5ACP98088 5654 aa7.15□□□□□ -1.26
TCF4-259ENST00000627568 MT3P25713 68 aa7.13□□□□□ -1.27
TCF4-259ENST00000627568 KRTAP9-9Q9BYP9 154 aa7.07□□□□□ -1.28
TCF4-259ENST00000627568 KRTAP5-1Q6L8H4 278 aa6.89□□□□□ -1.31
TCF4-259ENST00000627568 PRO0628Q9UI54 55 aa6.83□□□□□ -1.32
TCF4-259ENST00000627568 PMAIP1Q13794 54 aa6.8□□□□□ -1.32
TCF4-259ENST00000627568 LCE1EQ5T753 118 aa6.57□□□□□ -1.36
TCF4-259ENST00000627568 PRAC1Q96KF2 57 aa6.42□□□□□ -1.38
TCF4-259ENST00000627568 KTN1-AS1Q86SY8 53 aa6.38□□□□□ -1.39
TCF4-259ENST00000627568 LCE1BQ5T7P3 118 aa6.22□□□□□ -1.41
TCF4-259ENST00000627568 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
TCF4-259ENST00000627568 LCE1CQ5T751 118 aa6.09□□□□□ -1.43
TCF4-259ENST00000627568 SVIPQ8NHG7 77 aa6□□□□□ -1.45
TCF4-259ENST00000627568 KRTAP4-12Q9BQ66 201 aa6□□□□□ -1.45
TCF4-259ENST00000627568 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
TCF4-259ENST00000627568 KRTAP5-11Q6L8G4 156 aa5.54□□□□□ -1.52
TCF4-259ENST00000627568 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.51□□□□□ -1.53
TCF4-259ENST00000627568 LCE1FQ5T754 118 aa5.44□□□□□ -1.54
TCF4-259ENST00000627568 H3BS24 57 aa5.4□□□□□ -1.54
TCF4-259ENST00000627568 LCE3EQ5T5B0 92 aa5.37□□□□□ -1.55
TCF4-259ENST00000627568 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
TCF4-259ENST00000627568 KRTAP21-2Q3LI59 83 aa5.06□□□□□ -1.6
TCF4-259ENST00000627568 PHGR1C9JFL3 82 aa4.99□□□□□ -1.61
TCF4-259ENST00000627568 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
TCF4-259ENST00000627568 KRTAP4-4Q9BYR3 166 aa4.68□□□□□ -1.66
TCF4-259ENST00000627568 MUC19Q7Z5P9 8384 aa4.47□□□□□ -1.69
TCF4-259ENST00000627568 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
TCF4-259ENST00000627568 INE1O15225 51 aa4.01□□□□□ -1.77
TCF4-259ENST00000627568 PRM1P04553 51 aa3.92□□□□□ -1.78
TCF4-259ENST00000627568 KRTAP21-1Q3LI58 79 aa3.8□□□□□ -1.8
TCF4-259ENST00000627568 MUC16Q8WXI7 14507 aa3.14□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 2237.5 ms