RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 LINC01558Q9Y6Z2 57 aa2.94□□□□□ -1.94
NPLOC4-221ENST00000625705 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
NPLOC4-221ENST00000625705 A8MU10 97 aa2.91□□□□□ -1.94
NPLOC4-221ENST00000625705 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
NPLOC4-221ENST00000625705 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
NPLOC4-221ENST00000625705 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
NPLOC4-221ENST00000625705 UQCR11O14957 56 aa2.89□□□□□ -1.95
NPLOC4-221ENST00000625705 Q1T7F1 81 aa2.89□□□□□ -1.95
NPLOC4-221ENST00000625705 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
NPLOC4-221ENST00000625705 PSPHP1O15172 72 aa2.86□□□□□ -1.95
NPLOC4-221ENST00000625705 MIR22HGQ0VDD5 57 aa2.84□□□□□ -1.95
NPLOC4-221ENST00000625705 K7ERS5 55 aa2.83□□□□□ -1.96
NPLOC4-221ENST00000625705 SPRR2EP22531 72 aa2.82□□□□□ -1.96
NPLOC4-221ENST00000625705 SPRR2BP35325 72 aa2.82□□□□□ -1.96
NPLOC4-221ENST00000625705 SPRR2AP35326 72 aa2.82□□□□□ -1.96
NPLOC4-221ENST00000625705 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
NPLOC4-221ENST00000625705 A6NED7 52 aa2.81□□□□□ -1.96
NPLOC4-221ENST00000625705 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
NPLOC4-221ENST00000625705 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
NPLOC4-221ENST00000625705 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
NPLOC4-221ENST00000625705 TNP1P09430 55 aa2.78□□□□□ -1.96
NPLOC4-221ENST00000625705 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
NPLOC4-221ENST00000625705 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
NPLOC4-221ENST00000625705 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
NPLOC4-221ENST00000625705 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
NPLOC4-221ENST00000625705 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
NPLOC4-221ENST00000625705 SPRR2DP22532 72 aa2.72□□□□□ -1.97
NPLOC4-221ENST00000625705 KTN1-AS1Q86SY8 53 aa2.72□□□□□ -1.97
NPLOC4-221ENST00000625705 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
NPLOC4-221ENST00000625705 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
NPLOC4-221ENST00000625705 KRTAP25-1Q3LHN0 102 aa2.67□□□□□ -1.98
NPLOC4-221ENST00000625705 KRTAP19-5Q3LI72 72 aa2.67□□□□□ -1.98
NPLOC4-221ENST00000625705 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
NPLOC4-221ENST00000625705 MT1EP04732 61 aa2.66□□□□□ -1.98
NPLOC4-221ENST00000625705 KMT2DO14686 5537 aa2.66□□□□□ -1.98
NPLOC4-221ENST00000625705 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
NPLOC4-221ENST00000625705 NEBP20929 6669 aa2.63□□□□□ -1.99
NPLOC4-221ENST00000625705 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
NPLOC4-221ENST00000625705 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
NPLOC4-221ENST00000625705 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
NPLOC4-221ENST00000625705 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
NPLOC4-221ENST00000625705 ROMO1P60602 79 aa2.59□□□□□ -1.99
NPLOC4-221ENST00000625705 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
NPLOC4-221ENST00000625705 MT1GP13640 62 aa2.58□□□□□ -2
NPLOC4-221ENST00000625705 MT1LQ93083 61 aa2.56□□□□□ -2
NPLOC4-221ENST00000625705 MDN1Q9NU22 5596 aa2.54□□□□□ -2
NPLOC4-221ENST00000625705 MT1MQ8N339 61 aa2.53□□□□□ -2
NPLOC4-221ENST00000625705 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
NPLOC4-221ENST00000625705 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
NPLOC4-221ENST00000625705 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
NPLOC4-221ENST00000625705 MT4P47944 62 aa2.37□□□□□ -2.03
NPLOC4-221ENST00000625705 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
NPLOC4-221ENST00000625705 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
NPLOC4-221ENST00000625705 SPRR5A0A1B0GTR4 108 aa2.2□□□□□ -2.06
NPLOC4-221ENST00000625705 MT1AP04731 61 aa2.2□□□□□ -2.06
NPLOC4-221ENST00000625705 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
NPLOC4-221ENST00000625705 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
NPLOC4-221ENST00000625705 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
NPLOC4-221ENST00000625705 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
NPLOC4-221ENST00000625705 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
NPLOC4-221ENST00000625705 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
NPLOC4-221ENST00000625705 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
NPLOC4-221ENST00000625705 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
NPLOC4-221ENST00000625705 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
NPLOC4-221ENST00000625705 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
NPLOC4-221ENST00000625705 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
NPLOC4-221ENST00000625705 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
NPLOC4-221ENST00000625705 INE1O15225 51 aa1.87□□□□□ -2.11
NPLOC4-221ENST00000625705 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
NPLOC4-221ENST00000625705 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
NPLOC4-221ENST00000625705 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
NPLOC4-221ENST00000625705 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
NPLOC4-221ENST00000625705 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
NPLOC4-221ENST00000625705 PRM1P04553 51 aa1.33□□□□□ -2.2
NPLOC4-221ENST00000625705 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
NPLOC4-221ENST00000625705 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
NPLOC4-221ENST00000625705 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 69.7 ms