RNA–Protein interactions for RNA: ENST00000625044.1

PCDHB16-202, Transcript of protocadherin beta 16, humanhuman

TSL 2

Gene PCDHB16, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-202ENST00000625044 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
PCDHB16-202ENST00000625044 DSTQ03001 7570 aaKnown RBP7.15□□□□□ -1.27
PCDHB16-202ENST00000625044 K7ERS5 55 aa7.14□□□□□ -1.27
PCDHB16-202ENST00000625044 MT1MQ8N339 61 aa7.12□□□□□ -1.27
PCDHB16-202ENST00000625044 PCP4P48539 62 aa7.11□□□□□ -1.27
PCDHB16-202ENST00000625044 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
PCDHB16-202ENST00000625044 RPS28P62857 69 aaKnown RBP7.06□□□□□ -1.28
PCDHB16-202ENST00000625044 A6NED7 52 aa7.05□□□□□ -1.28
PCDHB16-202ENST00000625044 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
PCDHB16-202ENST00000625044 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.3
PCDHB16-202ENST00000625044 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
PCDHB16-202ENST00000625044 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
PCDHB16-202ENST00000625044 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
PCDHB16-202ENST00000625044 CDC42SE1Q9NRR8 79 aa6.8□□□□□ -1.32
PCDHB16-202ENST00000625044 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
PCDHB16-202ENST00000625044 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
PCDHB16-202ENST00000625044 ROMO1P60602 79 aa6.71□□□□□ -1.34
PCDHB16-202ENST00000625044 KRTAP5-4Q6L8H1 288 aa6.69□□□□□ -1.34
PCDHB16-202ENST00000625044 MT4P47944 62 aa6.68□□□□□ -1.34
PCDHB16-202ENST00000625044 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
PCDHB16-202ENST00000625044 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
PCDHB16-202ENST00000625044 HMCN1Q96RW7 5635 aa6.61□□□□□ -1.35
PCDHB16-202ENST00000625044 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
PCDHB16-202ENST00000625044 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
PCDHB16-202ENST00000625044 KRTAP5-5Q701N2 237 aaPredicted RBP6.53□□□□□ -1.36
PCDHB16-202ENST00000625044 LCE3CQ5T5A8 94 aa6.51□□□□□ -1.37
PCDHB16-202ENST00000625044 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
PCDHB16-202ENST00000625044 H3BS24 57 aa6.45□□□□□ -1.38
PCDHB16-202ENST00000625044 AHNAK2Q8IVF2 5795 aa6.3□□□□□ -1.4
PCDHB16-202ENST00000625044 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
PCDHB16-202ENST00000625044 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
PCDHB16-202ENST00000625044 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
PCDHB16-202ENST00000625044 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
PCDHB16-202ENST00000625044 SYNE1Q8NF91 8797 aaKnown RBP6.18□□□□□ -1.42
PCDHB16-202ENST00000625044 KRTAP9-6A8MVA2 160 aa6.17□□□□□ -1.42
PCDHB16-202ENST00000625044 KRTAP5-10Q6L8G5 202 aa6.17□□□□□ -1.42
PCDHB16-202ENST00000625044 MT1AP04731 61 aa6.11□□□□□ -1.43
PCDHB16-202ENST00000625044 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
PCDHB16-202ENST00000625044 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
PCDHB16-202ENST00000625044 KRTAP4-12Q9BQ66 201 aa6□□□□□ -1.45
PCDHB16-202ENST00000625044 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
PCDHB16-202ENST00000625044 KRTAP5-2Q701N4 177 aa5.9□□□□□ -1.46
PCDHB16-202ENST00000625044 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
PCDHB16-202ENST00000625044 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
PCDHB16-202ENST00000625044 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
PCDHB16-202ENST00000625044 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
PCDHB16-202ENST00000625044 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
PCDHB16-202ENST00000625044 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
PCDHB16-202ENST00000625044 MT3P25713 68 aa5.57□□□□□ -1.52
PCDHB16-202ENST00000625044 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
PCDHB16-202ENST00000625044 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
PCDHB16-202ENST00000625044 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.54
PCDHB16-202ENST00000625044 KRTAP5-1Q6L8H4 278 aa5.26□□□□□ -1.57
PCDHB16-202ENST00000625044 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
PCDHB16-202ENST00000625044 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
PCDHB16-202ENST00000625044 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
PCDHB16-202ENST00000625044 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
PCDHB16-202ENST00000625044 AHNAKQ09666 5890 aaKnown RBP5.12□□□□□ -1.59
PCDHB16-202ENST00000625044 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
PCDHB16-202ENST00000625044 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
PCDHB16-202ENST00000625044 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
PCDHB16-202ENST00000625044 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
PCDHB16-202ENST00000625044 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
PCDHB16-202ENST00000625044 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
PCDHB16-202ENST00000625044 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
PCDHB16-202ENST00000625044 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
PCDHB16-202ENST00000625044 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
PCDHB16-202ENST00000625044 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
PCDHB16-202ENST00000625044 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
PCDHB16-202ENST00000625044 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
PCDHB16-202ENST00000625044 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
PCDHB16-202ENST00000625044 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
PCDHB16-202ENST00000625044 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
PCDHB16-202ENST00000625044 PRM1P04553 51 aa3.45□□□□□ -1.86
PCDHB16-202ENST00000625044 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
PCDHB16-202ENST00000625044 INE1O15225 51 aa3.11□□□□□ -1.91
PCDHB16-202ENST00000625044 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
PCDHB16-202ENST00000625044 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 79.2 ms