RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
PCDHB9-203ENST00000624909 A0A0D9SG42 100 aa3.32□□□□□ -1.88
PCDHB9-203ENST00000624909 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
PCDHB9-203ENST00000624909 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
PCDHB9-203ENST00000624909 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
PCDHB9-203ENST00000624909 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
PCDHB9-203ENST00000624909 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
PCDHB9-203ENST00000624909 PSPHP1O15172 72 aa3.24□□□□□ -1.89
PCDHB9-203ENST00000624909 K7ERS5 55 aa3.23□□□□□ -1.89
PCDHB9-203ENST00000624909 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
PCDHB9-203ENST00000624909 A6NED7 52 aa3.19□□□□□ -1.9
PCDHB9-203ENST00000624909 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
PCDHB9-203ENST00000624909 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
PCDHB9-203ENST00000624909 KMT2DO14686 5537 aa3.15□□□□□ -1.9
PCDHB9-203ENST00000624909 TNP1P09430 55 aa3.15□□□□□ -1.91
PCDHB9-203ENST00000624909 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
PCDHB9-203ENST00000624909 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
PCDHB9-203ENST00000624909 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
PCDHB9-203ENST00000624909 CDC42SE1Q9NRR8 79 aa3.1□□□□□ -1.91
PCDHB9-203ENST00000624909 NEBP20929 6669 aa3.09□□□□□ -1.91
PCDHB9-203ENST00000624909 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
PCDHB9-203ENST00000624909 KRTAP25-1Q3LHN0 102 aa3.08□□□□□ -1.92
PCDHB9-203ENST00000624909 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
PCDHB9-203ENST00000624909 SPRR2EP22531 72 aa3.03□□□□□ -1.92
PCDHB9-203ENST00000624909 SPRR2BP35325 72 aa3.03□□□□□ -1.92
PCDHB9-203ENST00000624909 SPRR2AP35326 72 aa3.03□□□□□ -1.92
PCDHB9-203ENST00000624909 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
PCDHB9-203ENST00000624909 ROMO1P60602 79 aa2.99□□□□□ -1.93
PCDHB9-203ENST00000624909 MT1EP04732 61 aa2.98□□□□□ -1.93
PCDHB9-203ENST00000624909 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
PCDHB9-203ENST00000624909 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
PCDHB9-203ENST00000624909 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.94
PCDHB9-203ENST00000624909 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
PCDHB9-203ENST00000624909 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
PCDHB9-203ENST00000624909 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
PCDHB9-203ENST00000624909 SPRR2DP22532 72 aa2.94□□□□□ -1.94
PCDHB9-203ENST00000624909 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
PCDHB9-203ENST00000624909 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
PCDHB9-203ENST00000624909 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
PCDHB9-203ENST00000624909 MT1GP13640 62 aa2.93□□□□□ -1.94
PCDHB9-203ENST00000624909 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
PCDHB9-203ENST00000624909 BRK1Q8WUW1 75 aa2.92□□□□□ -1.94
PCDHB9-203ENST00000624909 MT1LQ93083 61 aa2.88□□□□□ -1.95
PCDHB9-203ENST00000624909 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
PCDHB9-203ENST00000624909 MT1MQ8N339 61 aa2.82□□□□□ -1.96
PCDHB9-203ENST00000624909 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
PCDHB9-203ENST00000624909 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
PCDHB9-203ENST00000624909 PRO0628Q9UI54 55 aa2.76□□□□□ -1.97
PCDHB9-203ENST00000624909 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
PCDHB9-203ENST00000624909 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
PCDHB9-203ENST00000624909 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
PCDHB9-203ENST00000624909 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
PCDHB9-203ENST00000624909 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
PCDHB9-203ENST00000624909 KRTAP12-4P60329 112 aa2.53□□□□□ -2
PCDHB9-203ENST00000624909 MT4P47944 62 aa2.51□□□□□ -2.01
PCDHB9-203ENST00000624909 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
PCDHB9-203ENST00000624909 MT1AP04731 61 aa2.47□□□□□ -2.01
PCDHB9-203ENST00000624909 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
PCDHB9-203ENST00000624909 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
PCDHB9-203ENST00000624909 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
PCDHB9-203ENST00000624909 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
PCDHB9-203ENST00000624909 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PCDHB9-203ENST00000624909 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PCDHB9-203ENST00000624909 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
PCDHB9-203ENST00000624909 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
PCDHB9-203ENST00000624909 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
PCDHB9-203ENST00000624909 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
PCDHB9-203ENST00000624909 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
PCDHB9-203ENST00000624909 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
PCDHB9-203ENST00000624909 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
PCDHB9-203ENST00000624909 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
PCDHB9-203ENST00000624909 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
PCDHB9-203ENST00000624909 INE1O15225 51 aa1.67□□□□□ -2.14
PCDHB9-203ENST00000624909 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
PCDHB9-203ENST00000624909 PRM1P04553 51 aa1.49□□□□□ -2.17
PCDHB9-203ENST00000624909 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
PCDHB9-203ENST00000624909 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
PCDHB9-203ENST00000624909 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 73.6 ms