RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MACF1Q9UPN3 7388 aaKnown RBP6.84□□□□□ -1.31
PCDHB11-202ENST00000624887 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.32
PCDHB11-202ENST00000624887 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
PCDHB11-202ENST00000624887 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
PCDHB11-202ENST00000624887 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
PCDHB11-202ENST00000624887 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
PCDHB11-202ENST00000624887 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
PCDHB11-202ENST00000624887 MT1GP13640 62 aa6.6□□□□□ -1.35
PCDHB11-202ENST00000624887 KRTAP5-9P26371 169 aa6.57□□□□□ -1.36
PCDHB11-202ENST00000624887 MT1MQ8N339 61 aa6.57□□□□□ -1.36
PCDHB11-202ENST00000624887 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
PCDHB11-202ENST00000624887 KRTAP4-3Q9BYR4 195 aa6.51□□□□□ -1.37
PCDHB11-202ENST00000624887 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
PCDHB11-202ENST00000624887 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
PCDHB11-202ENST00000624887 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
PCDHB11-202ENST00000624887 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
PCDHB11-202ENST00000624887 KRTAP6-3Q3LI67 103 aa6.42□□□□□ -1.38
PCDHB11-202ENST00000624887 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.39
PCDHB11-202ENST00000624887 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
PCDHB11-202ENST00000624887 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
PCDHB11-202ENST00000624887 SPRR2EP22531 72 aa6.31□□□□□ -1.4
PCDHB11-202ENST00000624887 SPRR2BP35325 72 aa6.31□□□□□ -1.4
PCDHB11-202ENST00000624887 SPRR2AP35326 72 aa6.31□□□□□ -1.4
PCDHB11-202ENST00000624887 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
PCDHB11-202ENST00000624887 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.43
PCDHB11-202ENST00000624887 SPRR2DP22532 72 aa6.07□□□□□ -1.44
PCDHB11-202ENST00000624887 NEBP20929 6669 aa5.96□□□□□ -1.46
PCDHB11-202ENST00000624887 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
PCDHB11-202ENST00000624887 MT1AP04731 61 aa5.87□□□□□ -1.47
PCDHB11-202ENST00000624887 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
PCDHB11-202ENST00000624887 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
PCDHB11-202ENST00000624887 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
PCDHB11-202ENST00000624887 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
PCDHB11-202ENST00000624887 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
PCDHB11-202ENST00000624887 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
PCDHB11-202ENST00000624887 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
PCDHB11-202ENST00000624887 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
PCDHB11-202ENST00000624887 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
PCDHB11-202ENST00000624887 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
PCDHB11-202ENST00000624887 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
PCDHB11-202ENST00000624887 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
PCDHB11-202ENST00000624887 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
PCDHB11-202ENST00000624887 MT3P25713 68 aa5.29□□□□□ -1.56
PCDHB11-202ENST00000624887 MT4P47944 62 aa5.27□□□□□ -1.57
PCDHB11-202ENST00000624887 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
PCDHB11-202ENST00000624887 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
PCDHB11-202ENST00000624887 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
PCDHB11-202ENST00000624887 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
PCDHB11-202ENST00000624887 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
PCDHB11-202ENST00000624887 PRM1P04553 51 aa5□□□□□ -1.61
PCDHB11-202ENST00000624887 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
PCDHB11-202ENST00000624887 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
PCDHB11-202ENST00000624887 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
PCDHB11-202ENST00000624887 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
PCDHB11-202ENST00000624887 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
PCDHB11-202ENST00000624887 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
PCDHB11-202ENST00000624887 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
PCDHB11-202ENST00000624887 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
PCDHB11-202ENST00000624887 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
PCDHB11-202ENST00000624887 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
PCDHB11-202ENST00000624887 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
PCDHB11-202ENST00000624887 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
PCDHB11-202ENST00000624887 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
PCDHB11-202ENST00000624887 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.74
PCDHB11-202ENST00000624887 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
PCDHB11-202ENST00000624887 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
PCDHB11-202ENST00000624887 KRTAP21-2Q3LI59 83 aa3.82□□□□□ -1.8
PCDHB11-202ENST00000624887 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
PCDHB11-202ENST00000624887 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
PCDHB11-202ENST00000624887 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
PCDHB11-202ENST00000624887 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
PCDHB11-202ENST00000624887 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
PCDHB11-202ENST00000624887 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
PCDHB11-202ENST00000624887 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
PCDHB11-202ENST00000624887 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
PCDHB11-202ENST00000624887 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
PCDHB11-202ENST00000624887 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 125.3 ms